eF-site ID 3ofi-B
PDB Code 3ofi
Chain B

click to enlarge
Title Crystal structure of human insulin-degrading enzyme in complex with ubiquitin
Classification HYDROLASE
Compound Insulin-degrading enzyme
Source null (UBC_HUMAN)
Sequence B:  NNPAIKRIGNHITKSPEDKREYRGLELANGIKVLLISDPT
TDKSSAALDVHIGSLSDPPNIAGLSHFLQHMLFLGTKKYP
KENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGAL
DRFAQFFLSPLFDESAKDREVNAVDSEHEKNVMNDAWRLF
QLEKATGNPKHPFSKFGTGNKYTLETRPNQEGIDVRQELL
KFHSAYYSSNLMAVVVLGRESLDDLTNLVVKLFSEVENKN
VPLPEFPEHPFQEEHLKQLYKIVPIKDIRNLYVTFPIPDL
QKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGG
QKEGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLR
AEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILH
YYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVS
KSFEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKF
KLPTKNEFIPTNFEILPLEKEATPYPALIKDTAMSKLWFK
QDDKFFLPKANLNFEFFSPFAYVDPLHSNMAYLYLELLKD
SLNEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILL
KKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHA
MYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSR
LHIEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQ
LVRYREVQLPDRGWFVYQQRNEVHNNSGIEIYYQTDMQST
SENMFLELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANG
IQGLRFIIQSEKPPHYLESRVEAFLITMEKSIEDMTEEAF
QKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDN
TEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLARE
MNLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPH
Description


Functional site

1) chain B
residue 108
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 2012
source : AC3

2) chain B
residue 112
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 2012
source : AC3

3) chain B
residue 189
type
sequence E
description BINDING SITE FOR RESIDUE ZN B 2012
source : AC3

4) chain B
residue 205
type
sequence E
description BINDING SITE FOR RESIDUE DIO B 2013
source : AC4

5) chain B
residue 477
type
sequence R
description BINDING SITE FOR RESIDUE DIO B 2013
source : AC4

6) chain B
residue 479
type
sequence A
description BINDING SITE FOR RESIDUE DIO B 2013
source : AC4

7) chain B
residue 800
type
sequence Q
description BINDING SITE FOR RESIDUE DIO B 2014
source : AC5

8) chain B
residue 840
type
sequence A
description BINDING SITE FOR RESIDUE DIO B 2014
source : AC5

9) chain B
residue 841
type
sequence N
description BINDING SITE FOR RESIDUE DIO B 2014
source : AC5

10) chain B
residue 842
type
sequence G
description BINDING SITE FOR RESIDUE DIO B 2014
source : AC5

11) chain B
residue 192
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603
source Swiss-Prot : SWS_FT_FI6

12) chain B
residue 697
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603
source Swiss-Prot : SWS_FT_FI6

13) chain B
residue 108
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

14) chain B
residue 112
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

15) chain B
residue 189
type SITE
sequence E
description Essential for function
source Swiss-Prot : SWS_FT_FI2

16) chain B
residue 429
type MOD_RES
sequence R
description ADP-ribosylglycine => ECO:0000269|PubMed:28525742
source Swiss-Prot : SWS_FT_FI5

17) chain B
residue 895
type MOD_RES
sequence D
description ADP-ribosylglycine => ECO:0000269|PubMed:28525742
source Swiss-Prot : SWS_FT_FI5


Display surface

Download
Links