eF-site ID 3o2y-B
PDB Code 3o2y
Chain B

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Title Structure-function analysis of human L-Prostaglandin D Synthase bound with fatty acid
Classification ISOMERASE
Compound Prostaglandin-H2 D-isomerase
Source null (PTGDS_HUMAN)
Sequence B:  SVQPNFQQDKFLGRWFSAGLASNSSWLREKKAALSMAKSV
VAPATDGGLNLTSTFLRKNQCETRTMLLQPAGSLGSYSYR
SPHWGSTYSVSVVETDYDQYALLYSQGSKGPGEDFRMATL
YSRTQTPRAELKEKFTAFCKAQGFTEDTIVFLPQTDKCMT
Description (1)  Prostaglandin-H2 D-isomerase (E.C.5.3.99.2)


Functional site

1) chain B
residue 55
type
sequence L
description BINDING SITE FOR RESIDUE OLA B 202
source : AC3

2) chain B
residue 59
type
sequence K
description BINDING SITE FOR RESIDUE OLA B 202
source : AC3

3) chain B
residue 62
type
sequence L
description BINDING SITE FOR RESIDUE OLA B 202
source : AC3

4) chain B
residue 64
type
sequence M
description BINDING SITE FOR RESIDUE OLA B 202
source : AC3

5) chain B
residue 83
type
sequence F
description BINDING SITE FOR RESIDUE OLA B 202
source : AC3

6) chain B
residue 94
type
sequence M
description BINDING SITE FOR RESIDUE OLA B 202
source : AC3

7) chain B
residue 145
type
sequence M
description BINDING SITE FOR RESIDUE OLA B 202
source : AC3

8) chain B
residue 147
type
sequence T
description BINDING SITE FOR RESIDUE OLA B 202
source : AC3

9) chain B
residue 149
type
sequence Y
description BINDING SITE FOR RESIDUE OLA B 202
source : AC3

10) chain B
residue 51
type
sequence N
description BINDING SITE FOR RESIDUE PLM B 203
source : AC4

11) chain B
residue 52
type
sequence S
description BINDING SITE FOR RESIDUE PLM B 203
source : AC4

12) chain B
residue 54
type
sequence W
description BINDING SITE FOR RESIDUE PLM B 203
source : AC4

13) chain B
residue 55
type
sequence L
description BINDING SITE FOR RESIDUE PLM B 203
source : AC4

14) chain B
residue 94
type
sequence M
description BINDING SITE FOR RESIDUE PLM B 203
source : AC4

15) chain B
residue 133
type
sequence S
description BINDING SITE FOR RESIDUE PLM B 203
source : AC4

16) chain B
residue 143
type
sequence F
description BINDING SITE FOR RESIDUE PLM B 203
source : AC4

17) chain B
residue 145
type
sequence M
description BINDING SITE FOR RESIDUE PLM B 203
source : AC4

18) chain B
residue 73
type
sequence T
description BINDING SITE FOR RESIDUE GOL B 252
source : AC5

19) chain B
residue 78
type
sequence N
description BINDING SITE FOR RESIDUE GOL B 252
source : AC5

20) chain B
residue 78
type CARBOHYD
sequence N
description N-linked (GlcNAc...) (complex) asparagine => ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19139490, ECO:0000269|PubMed:19838169, ECO:0000269|PubMed:22171320, ECO:0000269|PubMed:8336134
source Swiss-Prot : SWS_FT_FI4

21) chain B
residue 65
type ACT_SITE
sequence A
description Nucleophile => ECO:0000269|PubMed:20667974
source Swiss-Prot : SWS_FT_FI1

22) chain B
residue 29
type CARBOHYD
sequence S
description O-linked (GalNAc...) serine => ECO:0000269|PubMed:23234360
source Swiss-Prot : SWS_FT_FI2

23) chain B
residue 51
type CARBOHYD
sequence N
description N-linked (GlcNAc...) (complex) asparagine => ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:19838169, ECO:0000269|PubMed:8336134
source Swiss-Prot : SWS_FT_FI3


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