eF-site ID 3o0e-C
PDB Code 3o0e
Chain C

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Title Crystal structure of OmpF in complex with colicin peptide OBS1
Classification MEMBRANE PROTEIN
Compound Porin OmpF
Source ORGANISM_SCIENTIFIC: Escherichia coli;
Sequence C:  AEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDMTY
ARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK
TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGG
DTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGK
NERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQ
EAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPI
TNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKA
KDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDS
DNKLGVGSDDTVAVGIVYQF
Description


Functional site

1) chain C
residue 21
type
sequence H
description binding site for residue BOG C 401
source : AC2

2) chain C
residue 36
type
sequence G
description binding site for residue BOG C 401
source : AC2

3) chain C
residue 334
type
sequence V
description binding site for residue BOG C 401
source : AC2

4) chain C
residue 98
type
sequence Y
description binding site for residue BOG E 402
source : AC5

5) chain C
residue 157
type
sequence Y
description binding site for residue BOG E 402
source : AC5

6) chain C
residue 172
type
sequence D
description binding site for residue BOG E 402
source : AC5

7) chain C
residue 1-6
type TRANSMEM
sequence AEIYNK
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

8) chain C
residue 8-23
type TRANSMEM
sequence GNKVDLYGKAVGLHYF
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

9) chain C
residue 39-51
type TRANSMEM
sequence TYARLGFKGETQI
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

10) chain C
residue 54-66
type TRANSMEM
sequence DLTGYGQWEYNFQ
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

11) chain C
residue 83-91
type TRANSMEM
sequence LAFAGLKYA
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

12) chain C
residue 94-100
type TRANSMEM
sequence GSFDYGR
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

13) chain C
residue 135-141
type TRANSMEM
sequence GVATYRN
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

14) chain C
residue 150-159
type TRANSMEM
sequence GLNFAVQYLG
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

15) chain C
residue 172-182
type TRANSMEM
sequence DGVGGSISYEY
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

16) chain C
residue 184-195
type TRANSMEM
sequence GFGIVGAYGAAD
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

17) chain C
residue 211-222
type TRANSMEM
sequence AEQWATGLKYDA
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

18) chain C
residue 224-235
type TRANSMEM
sequence NIYLAANYGETR
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

19) chain C
residue 253-265
type TRANSMEM
sequence KTQDVLLVAQYQF
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

20) chain C
residue 268-281
type TRANSMEM
sequence GLRPSIAYTKSKAK
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

21) chain C
residue 292-303
type TRANSMEM
sequence VNYFEVGATYYF
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

22) chain C
residue 306-315
type TRANSMEM
sequence NMSTYVDYII
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

23) chain C
residue 331-340
type TRANSMEM
sequence TVAVGIVYQF
description Beta stranded
source Swiss-Prot : SWS_FT_FI1

24) chain C
residue 7
type TOPO_DOM
sequence D
description Periplasmic
source Swiss-Prot : SWS_FT_FI2

25) chain C
residue 52-53
type TOPO_DOM
sequence NS
description Periplasmic
source Swiss-Prot : SWS_FT_FI2

26) chain C
residue 92-93
type TOPO_DOM
sequence DV
description Periplasmic
source Swiss-Prot : SWS_FT_FI2

27) chain C
residue 142-149
type TOPO_DOM
sequence SNFFGLVD
description Periplasmic
source Swiss-Prot : SWS_FT_FI2

28) chain C
residue 183
type TOPO_DOM
sequence E
description Periplasmic
source Swiss-Prot : SWS_FT_FI2

29) chain C
residue 223
type TOPO_DOM
sequence N
description Periplasmic
source Swiss-Prot : SWS_FT_FI2

30) chain C
residue 266-267
type TOPO_DOM
sequence DF
description Periplasmic
source Swiss-Prot : SWS_FT_FI2

31) chain C
residue 304-305
type TOPO_DOM
sequence NK
description Periplasmic
source Swiss-Prot : SWS_FT_FI2

32) chain C
residue 24-38
type TOPO_DOM
sequence SKGNGENSYGGNGDM
description Extracellular
source Swiss-Prot : SWS_FT_FI3

33) chain C
residue 67-82
type TOPO_DOM
sequence GNNSEGADAQTGNKTR
description Extracellular
source Swiss-Prot : SWS_FT_FI3

34) chain C
residue 101-134
type TOPO_DOM
sequence NYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVG
description Extracellular
source Swiss-Prot : SWS_FT_FI3

35) chain C
residue 160-171
type TOPO_DOM
sequence KNERDTARRSNG
description Extracellular
source Swiss-Prot : SWS_FT_FI3

36) chain C
residue 196-210
type TOPO_DOM
sequence RTNLQEAQPLGNGKK
description Extracellular
source Swiss-Prot : SWS_FT_FI3

37) chain C
residue 236-252
type TOPO_DOM
sequence NATPITNKFTNTSGFAN
description Extracellular
source Swiss-Prot : SWS_FT_FI3

38) chain C
residue 282-291
type TOPO_DOM
sequence DVEGIGDVDL
description Extracellular
source Swiss-Prot : SWS_FT_FI3

39) chain C
residue 316-330
type TOPO_DOM
sequence NQIDSDNKLGVGSDD
description Extracellular
source Swiss-Prot : SWS_FT_FI3


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