eF-site ID 3o0e-A PDB Code 3o0e Chain A click to enlarge Title Crystal structure of OmpF in complex with colicin peptide OBS1 Classification MEMBRANE PROTEIN Compound Porin OmpF Source ORGANISM_SCIENTIFIC: Escherichia coli; Sequence A:  AEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDMTY ARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGG DTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGK NERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQ EAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPI TNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKA KDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDS DNKLGVGSDDTVAVGIVYQF Description Functional site 1) chain A residue 98 type sequence Y description binding site for residue BOG C 401 source : AC2 2) chain A residue 157 type sequence Y description binding site for residue BOG C 401 source : AC2 3) chain A residue 160 type sequence K description binding site for residue BOG C 401 source : AC2 4) chain A residue 172 type sequence D description binding site for residue BOG C 401 source : AC2 5) chain A residue 21 type sequence H description binding site for residue BOG E 401 source : AC4 6) chain A residue 23 type sequence F description binding site for residue BOG E 401 source : AC4 7) chain A residue 334 type sequence V description binding site for residue BOG E 401 source : AC4 8) chain A residue 335 type sequence G description binding site for residue BOG E 401 source : AC4 9) chain A residue 295-311 type prosite sequence FEVGATYYFNKNMSTYV description GRAM_NEG_PORIN General diffusion Gram-negative porins signature. FevGatYyFnKnmSTYV source prosite : PS00576 10) chain A residue 1-6 type TRANSMEM sequence AEIYNK description Beta stranded source Swiss-Prot : SWS_FT_FI1 11) chain A residue 8-23 type TRANSMEM sequence GNKVDLYGKAVGLHYF description Beta stranded source Swiss-Prot : SWS_FT_FI1 12) chain A residue 39-51 type TRANSMEM sequence TYARLGFKGETQI description Beta stranded source Swiss-Prot : SWS_FT_FI1 13) chain A residue 54-66 type TRANSMEM sequence DLTGYGQWEYNFQ description Beta stranded source Swiss-Prot : SWS_FT_FI1 14) chain A residue 83-91 type TRANSMEM sequence LAFAGLKYA description Beta stranded source Swiss-Prot : SWS_FT_FI1 15) chain A residue 94-100 type TRANSMEM sequence GSFDYGR description Beta stranded source Swiss-Prot : SWS_FT_FI1 16) chain A residue 135-141 type TRANSMEM sequence GVATYRN description Beta stranded source Swiss-Prot : SWS_FT_FI1 17) chain A residue 150-159 type TRANSMEM sequence GLNFAVQYLG description Beta stranded source Swiss-Prot : SWS_FT_FI1 18) chain A residue 172-182 type TRANSMEM sequence DGVGGSISYEY description Beta stranded source Swiss-Prot : SWS_FT_FI1 19) chain A residue 184-195 type TRANSMEM sequence GFGIVGAYGAAD description Beta stranded source Swiss-Prot : SWS_FT_FI1 20) chain A residue 211-222 type TRANSMEM sequence AEQWATGLKYDA description Beta stranded source Swiss-Prot : SWS_FT_FI1 21) chain A residue 224-235 type TRANSMEM sequence NIYLAANYGETR description Beta stranded source Swiss-Prot : SWS_FT_FI1 22) chain A residue 253-265 type TRANSMEM sequence KTQDVLLVAQYQF description Beta stranded source Swiss-Prot : SWS_FT_FI1 23) chain A residue 268-281 type TRANSMEM sequence GLRPSIAYTKSKAK description Beta stranded source Swiss-Prot : SWS_FT_FI1 24) chain A residue 292-303 type TRANSMEM sequence VNYFEVGATYYF description Beta stranded source Swiss-Prot : SWS_FT_FI1 25) chain A residue 306-315 type TRANSMEM sequence NMSTYVDYII description Beta stranded source Swiss-Prot : SWS_FT_FI1 26) chain A residue 331-340 type TRANSMEM sequence TVAVGIVYQF description Beta stranded source Swiss-Prot : SWS_FT_FI1 27) chain A residue 7 type TOPO_DOM sequence D description Periplasmic source Swiss-Prot : SWS_FT_FI2 28) chain A residue 183 type TOPO_DOM sequence E description Periplasmic source Swiss-Prot : SWS_FT_FI2 29) chain A residue 223 type TOPO_DOM sequence N description Periplasmic source Swiss-Prot : SWS_FT_FI2 30) chain A residue 52-53 type TOPO_DOM sequence NS description Periplasmic source Swiss-Prot : SWS_FT_FI2 31) chain A residue 92-93 type TOPO_DOM sequence DV description Periplasmic source Swiss-Prot : SWS_FT_FI2 32) chain A residue 142-149 type TOPO_DOM sequence SNFFGLVD description Periplasmic source Swiss-Prot : SWS_FT_FI2 33) chain A residue 266-267 type TOPO_DOM sequence DF description Periplasmic source Swiss-Prot : SWS_FT_FI2 34) chain A residue 304-305 type TOPO_DOM sequence NK description Periplasmic source Swiss-Prot : SWS_FT_FI2 35) chain A residue 24-38 type TOPO_DOM sequence SKGNGENSYGGNGDM description Extracellular source Swiss-Prot : SWS_FT_FI3 36) chain A residue 67-82 type TOPO_DOM sequence GNNSEGADAQTGNKTR description Extracellular source Swiss-Prot : SWS_FT_FI3 37) chain A residue 101-134 type TOPO_DOM sequence NYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVG description Extracellular source Swiss-Prot : SWS_FT_FI3 38) chain A residue 160-171 type TOPO_DOM sequence KNERDTARRSNG description Extracellular source Swiss-Prot : SWS_FT_FI3 39) chain A residue 196-210 type TOPO_DOM sequence RTNLQEAQPLGNGKK description Extracellular source Swiss-Prot : SWS_FT_FI3 40) chain A residue 236-252 type TOPO_DOM sequence NATPITNKFTNTSGFAN description Extracellular source Swiss-Prot : SWS_FT_FI3 41) chain A residue 282-291 type TOPO_DOM sequence DVEGIGDVDL description Extracellular source Swiss-Prot : SWS_FT_FI3 42) chain A residue 316-330 type TOPO_DOM sequence NQIDSDNKLGVGSDD description Extracellular source Swiss-Prot : SWS_FT_FI3

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