eF-site ID 3nob-A PDB Code 3nob Chain A click to enlarge Title Structure of K11-linked di-ubiquitin Classification PROTEIN BINDING Compound Ubiquitin Source (UBIQ_HUMAN) Sequence A:  SHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG Description Functional site 1) chain A residue 39 type sequence D description BINDING SITE FOR RESIDUE SO4 A 77 source : AC1 2) chain A residue 40 type sequence Q description BINDING SITE FOR RESIDUE SO4 A 77 source : AC1 3) chain A residue 74 type sequence R description BINDING SITE FOR RESIDUE SO4 A 77 source : AC1 4) chain A residue 44 type sequence I description BINDING SITE FOR RESIDUE SO4 A 78 source : AC2 5) chain A residue 45 type sequence F description BINDING SITE FOR RESIDUE SO4 A 78 source : AC2 6) chain A residue 46 type sequence A description BINDING SITE FOR RESIDUE SO4 A 78 source : AC2 7) chain A residue 47 type sequence G description BINDING SITE FOR RESIDUE SO4 A 78 source : AC2 8) chain A residue 68 type sequence H description BINDING SITE FOR RESIDUE SO4 A 78 source : AC2 9) chain A residue 35 type sequence G description BINDING SITE FOR RESIDUE SO4 B 77 source : AC3 10) chain A residue 53 type sequence G description BINDING SITE FOR RESIDUE SO4 E 77 source : AC6 11) chain A residue 54 type SITE sequence R description Interacts with activating enzyme source Swiss-Prot : SWS_FT_FI1 12) chain A residue 72 type SITE sequence R description Interacts with activating enzyme source Swiss-Prot : SWS_FT_FI1 13) chain A residue 68 type SITE sequence H description Essential for function source Swiss-Prot : SWS_FT_FI2 14) chain A residue 65 type MOD_RES sequence S description Phosphoserine; by PINK1 => ECO:0000269|PubMed:24660806, ECO:0000269|PubMed:24751536, ECO:0000269|PubMed:24784582, ECO:0000269|PubMed:25527291 source Swiss-Prot : SWS_FT_FI3 15) chain A residue 63 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:18719106 source Swiss-Prot : SWS_FT_FI12 16) chain A residue 66 type MOD_RES sequence T description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457 source Swiss-Prot : SWS_FT_FI4 17) chain A residue 6 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603 source Swiss-Prot : SWS_FT_FI6 18) chain A residue 33 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:25752577 source Swiss-Prot : SWS_FT_FI11 19) chain A residue 27 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:15466860 source Swiss-Prot : SWS_FT_FI9 20) chain A residue 29 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:25752573, ECO:0000269|PubMed:25752577, ECO:0000269|PubMed:34239127 source Swiss-Prot : SWS_FT_FI10 21) chain A residue 11 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144 source Swiss-Prot : SWS_FT_FI8 22) chain A residue 48 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16443603, ECO:0000269|PubMed:16543144 source Swiss-Prot : SWS_FT_FI8 23) chain A residue 27-52 type prosite sequence KAKIQDKEGIPPDQQRLIFAGKQLED description UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD source prosite : PS00299

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