eF-site ID 3nf8-A PDB Code 3nf8 Chain A click to enlarge Title Structural basis for a new mechanism of inhibition of HIV integrase identified by fragment screening and structure based design Classification HYDROLASE/HYDROLASE INHIBITOR Compound Integrase Source (Q76353_9HIV1) Sequence A:  SPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQE TAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAACWWAGIK QEDGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAV QMAVFIHNHKRKGYSAGERIVDIIATDIQ Description Functional site 1) chain A residue 66 type sequence T description BINDING SITE FOR RESIDUE SO4 A 2 source : AC1 2) chain A residue 67 type sequence H description BINDING SITE FOR RESIDUE SO4 A 2 source : AC1 3) chain A residue 111 type sequence K description BINDING SITE FOR RESIDUE SO4 A 2 source : AC1 4) chain A residue 159 type sequence K description BINDING SITE FOR RESIDUE SO4 A 2 source : AC1 5) chain A residue 71 type sequence K description BINDING SITE FOR RESIDUE SO4 A 4 source : AC2 6) chain A residue 171 type sequence H description BINDING SITE FOR RESIDUE SO4 A 4 source : AC2 7) chain A residue 172 type sequence L description BINDING SITE FOR RESIDUE SO4 A 4 source : AC2 8) chain A residue 94 type sequence G description BINDING SITE FOR RESIDUE SO4 A 5 source : AC3 9) chain A residue 123 type sequence S description BINDING SITE FOR RESIDUE SO4 A 5 source : AC3 10) chain A residue 124 type sequence T description BINDING SITE FOR RESIDUE SO4 A 5 source : AC3 11) chain A residue 125 type sequence T description BINDING SITE FOR RESIDUE SO4 A 5 source : AC3 12) chain A residue 106 type sequence G description BINDING SITE FOR RESIDUE CDQ A 225 source : AC4 13) chain A residue 107 type sequence R description BINDING SITE FOR RESIDUE CDQ A 225 source : AC4 14) chain A residue 108 type sequence W description BINDING SITE FOR RESIDUE CDQ A 225 source : AC4 15) chain A residue 109 type sequence P description BINDING SITE FOR RESIDUE CDQ A 225 source : AC4 16) chain A residue 204 type sequence I description BINDING SITE FOR RESIDUE CDQ A 225 source : AC4 17) chain A residue 207 type sequence D description BINDING SITE FOR RESIDUE CDQ A 225 source : AC4 18) chain A residue 208 type sequence I description BINDING SITE FOR RESIDUE CDQ A 225 source : AC4 19) chain A residue 79 type sequence V description BINDING SITE FOR RESIDUE CDQ A 247 source : AC5 20) chain A residue 82 type sequence G description BINDING SITE FOR RESIDUE CDQ A 247 source : AC5 21) chain A residue 84 type sequence I description BINDING SITE FOR RESIDUE CDQ A 247 source : AC5 22) chain A residue 150 type sequence V description BINDING SITE FOR RESIDUE CDQ A 247 source : AC5 23) chain A residue 154 type sequence M description BINDING SITE FOR RESIDUE CDQ A 247 source : AC5 24) chain A residue 157 type sequence E description BINDING SITE FOR RESIDUE CDQ A 247 source : AC5 25) chain A residue 183 type sequence H description BINDING SITE FOR RESIDUE CDQ A 247 source : AC5 26) chain A residue 169 type sequence A description BINDING SITE FOR RESIDUE CDQ A 267 source : AC6 27) chain A residue 170 type sequence E description BINDING SITE FOR RESIDUE CDQ A 267 source : AC6 28) chain A residue 171 type sequence H description BINDING SITE FOR RESIDUE CDQ A 267 source : AC6 29) chain A residue 174 type sequence T description BINDING SITE FOR RESIDUE CDQ A 267 source : AC6 30) chain A residue 178 type sequence M description BINDING SITE FOR RESIDUE CDQ A 267 source : AC6 31) chain A residue 185 type sequence H description BINDING SITE FOR RESIDUE CDQ A 277 source : AC7 32) chain A residue 195 type sequence S description BINDING SITE FOR RESIDUE CDQ A 277 source : AC7 33) chain A residue 197 type sequence G description BINDING SITE FOR RESIDUE CDQ A 277 source : AC7 34) chain A residue 198 type sequence E description BINDING SITE FOR RESIDUE CDQ A 277 source : AC7 35) chain A residue 85 type sequence E description BINDING SITE FOR RESIDUE ACY A 1 source : AC8 36) chain A residue 87 type sequence E description BINDING SITE FOR RESIDUE ACY A 1 source : AC8 37) chain A residue 100 type sequence F description BINDING SITE FOR RESIDUE ACY A 1 source : AC8 38) chain A residue 103 type sequence K description BINDING SITE FOR RESIDUE ACY A 1 source : AC8 39) chain A residue 104 type sequence L description BINDING SITE FOR RESIDUE ACY A 1 source : AC8 40) chain A residue 186 type sequence K description BINDING SITE FOR RESIDUE SO4 B 6 source : BC2 41) chain A residue 95 type sequence Q description BINDING SITE FOR RESIDUE CDQ B 235 source : BC3 42) chain A residue 99 type sequence Y description BINDING SITE FOR RESIDUE CDQ B 235 source : BC3 43) chain A residue 125 type sequence T description BINDING SITE FOR RESIDUE CDQ B 235 source : BC3 44) chain A residue 128 type sequence A description BINDING SITE FOR RESIDUE CDQ B 235 source : BC3 45) chain A residue 132 type sequence W description BINDING SITE FOR RESIDUE CDQ B 235 source : BC3 46) chain A residue 107 type sequence R description BINDING SITE FOR RESIDUE ACY B 2 source : BC5 47) chain A residue 64 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI1 48) chain A residue 116 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI1 49) chain A residue 152 type BINDING sequence E description BINDING => ECO:0000250|UniProtKB:P04585 source Swiss-Prot : SWS_FT_FI2

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