eF-site ID 3n5c-AB
PDB Code 3n5c
Chain A, B

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Title Crystal Structure of Arf6DELTA13 complexed with GDP
Classification PROTEIN TRANSPORT
Compound ADP-ribosylation factor 6
Source Homo sapiens (Human) (ARF6_HUMAN)
Sequence A:  MRILMLGLDAAGKTTILYKLKLGQSVYKNVKFNVWDVGGQ
DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRII
NDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDR
NWYVQPSCATSGDGLYEGLTWLTSNYK
B:  MRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVT
YKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADR
DRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPH
EIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNY
Description


Functional site

1) chain A
residue 23
type
sequence A
description BINDING SITE FOR RESIDUE GDP A 200
source : AC1

2) chain A
residue 24
type
sequence A
description BINDING SITE FOR RESIDUE GDP A 200
source : AC1

3) chain A
residue 25
type
sequence G
description BINDING SITE FOR RESIDUE GDP A 200
source : AC1

4) chain A
residue 26
type
sequence K
description BINDING SITE FOR RESIDUE GDP A 200
source : AC1

5) chain A
residue 27
type
sequence T
description BINDING SITE FOR RESIDUE GDP A 200
source : AC1

6) chain A
residue 28
type
sequence T
description BINDING SITE FOR RESIDUE GDP A 200
source : AC1

7) chain A
residue 122
type
sequence N
description BINDING SITE FOR RESIDUE GDP A 200
source : AC1

8) chain A
residue 123
type
sequence K
description BINDING SITE FOR RESIDUE GDP A 200
source : AC1

9) chain A
residue 125
type
sequence D
description BINDING SITE FOR RESIDUE GDP A 200
source : AC1

10) chain A
residue 126
type
sequence L
description BINDING SITE FOR RESIDUE GDP A 200
source : AC1

11) chain A
residue 155
type
sequence C
description BINDING SITE FOR RESIDUE GDP A 200
source : AC1

12) chain A
residue 156
type
sequence A
description BINDING SITE FOR RESIDUE GDP A 200
source : AC1

13) chain A
residue 157
type
sequence T
description BINDING SITE FOR RESIDUE GDP A 200
source : AC1

14) chain B
residue 93
type
sequence R
description BINDING SITE FOR RESIDUE GDP A 200
source : AC1

15) chain B
residue 134
type
sequence E
description BINDING SITE FOR RESIDUE GDP A 200
source : AC1

16) chain A
residue 76
type
sequence H
description BINDING SITE FOR RESIDUE CL A 1
source : AC2

17) chain A
residue 78
type
sequence Y
description BINDING SITE FOR RESIDUE CL A 1
source : AC2

18) chain A
residue 105
type
sequence R
description BINDING SITE FOR RESIDUE CL A 1
source : AC2

19) chain A
residue 71
type
sequence R
description BINDING SITE FOR RESIDUE CL A 180
source : AC3

20) chain A
residue 75
type
sequence R
description BINDING SITE FOR RESIDUE CL A 180
source : AC3

21) chain B
residue 23
type
sequence A
description BINDING SITE FOR RESIDUE GDP B 200
source : AC4

22) chain B
residue 24
type
sequence A
description BINDING SITE FOR RESIDUE GDP B 200
source : AC4

23) chain B
residue 25
type
sequence G
description BINDING SITE FOR RESIDUE GDP B 200
source : AC4

24) chain B
residue 26
type
sequence K
description BINDING SITE FOR RESIDUE GDP B 200
source : AC4

25) chain B
residue 27
type
sequence T
description BINDING SITE FOR RESIDUE GDP B 200
source : AC4

26) chain B
residue 28
type
sequence T
description BINDING SITE FOR RESIDUE GDP B 200
source : AC4

27) chain B
residue 122
type
sequence N
description BINDING SITE FOR RESIDUE GDP B 200
source : AC4

28) chain B
residue 123
type
sequence K
description BINDING SITE FOR RESIDUE GDP B 200
source : AC4

29) chain B
residue 125
type
sequence D
description BINDING SITE FOR RESIDUE GDP B 200
source : AC4

30) chain B
residue 126
type
sequence L
description BINDING SITE FOR RESIDUE GDP B 200
source : AC4

31) chain B
residue 155
type
sequence C
description BINDING SITE FOR RESIDUE GDP B 200
source : AC4

32) chain B
residue 156
type
sequence A
description BINDING SITE FOR RESIDUE GDP B 200
source : AC4

33) chain B
residue 157
type
sequence T
description BINDING SITE FOR RESIDUE GDP B 200
source : AC4

34) chain B
residue 76
type
sequence H
description BINDING SITE FOR RESIDUE CL B 2
source : AC5

35) chain B
residue 78
type
sequence Y
description BINDING SITE FOR RESIDUE CL B 2
source : AC5

36) chain B
residue 105
type
sequence R
description BINDING SITE FOR RESIDUE CL B 2
source : AC5

37) chain A
residue 23
type BINDING
sequence A
description BINDING => ECO:0000269|PubMed:16099990, ECO:0000269|PubMed:19644450, ECO:0000269|PubMed:21170023, ECO:0000269|PubMed:22939626, ECO:0000269|PubMed:23940353
source Swiss-Prot : SWS_FT_FI1

38) chain B
residue 155
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:16099990, ECO:0000269|PubMed:19644450, ECO:0000269|PubMed:21170023, ECO:0000269|PubMed:22939626, ECO:0000269|PubMed:23940353
source Swiss-Prot : SWS_FT_FI1

39) chain A
residue 63
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:16099990, ECO:0000269|PubMed:19644450, ECO:0000269|PubMed:21170023, ECO:0000269|PubMed:22939626, ECO:0000269|PubMed:23940353
source Swiss-Prot : SWS_FT_FI1

40) chain A
residue 122
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:16099990, ECO:0000269|PubMed:19644450, ECO:0000269|PubMed:21170023, ECO:0000269|PubMed:22939626, ECO:0000269|PubMed:23940353
source Swiss-Prot : SWS_FT_FI1

41) chain A
residue 155
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:16099990, ECO:0000269|PubMed:19644450, ECO:0000269|PubMed:21170023, ECO:0000269|PubMed:22939626, ECO:0000269|PubMed:23940353
source Swiss-Prot : SWS_FT_FI1

42) chain B
residue 23
type BINDING
sequence A
description BINDING => ECO:0000269|PubMed:16099990, ECO:0000269|PubMed:19644450, ECO:0000269|PubMed:21170023, ECO:0000269|PubMed:22939626, ECO:0000269|PubMed:23940353
source Swiss-Prot : SWS_FT_FI1

43) chain B
residue 41
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:16099990, ECO:0000269|PubMed:19644450, ECO:0000269|PubMed:21170023, ECO:0000269|PubMed:22939626, ECO:0000269|PubMed:23940353
source Swiss-Prot : SWS_FT_FI1

44) chain B
residue 63
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:16099990, ECO:0000269|PubMed:19644450, ECO:0000269|PubMed:21170023, ECO:0000269|PubMed:22939626, ECO:0000269|PubMed:23940353
source Swiss-Prot : SWS_FT_FI1

45) chain B
residue 122
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:16099990, ECO:0000269|PubMed:19644450, ECO:0000269|PubMed:21170023, ECO:0000269|PubMed:22939626, ECO:0000269|PubMed:23940353
source Swiss-Prot : SWS_FT_FI1


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