eF-site ID 3n3b-ABCD
PDB Code 3n3b
Chain A, B, C, D

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Title Ribonucleotide Reductase Dimanganese(II)-NrdF from Escherichia coli in Complex with Reduced NrdI with a Trapped Peroxide
Classification OXIDOREDUCTASE
Compound Ribonucleoside-diphosphate reductase 2 subunit beta
Source null (NRDI_ECOLI)
Sequence A:  RISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPA
WQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALT
PHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAW
SEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYS
GFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQ
KNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAET
PWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILA
ALSP
B:  RISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPA
WQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALT
PHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAW
SEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYS
GFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQ
KNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAET
PWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILA
ALSP
C:  QLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPY
ILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASG
NRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVR
KGVTEFWQR
D:  QLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPY
ILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASG
NRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVR
KGVTEFWQR
Description


Functional site

1) chain B
residue 67
type
sequence D
description BINDING SITE FOR RESIDUE MN B 320
source : AC1

2) chain B
residue 98
type
sequence E
description BINDING SITE FOR RESIDUE MN B 320
source : AC1

3) chain B
residue 101
type
sequence H
description BINDING SITE FOR RESIDUE MN B 320
source : AC1

4) chain B
residue 158
type
sequence E
description BINDING SITE FOR RESIDUE MN B 320
source : AC1

5) chain B
residue 192
type
sequence E
description BINDING SITE FOR RESIDUE MN B 320
source : AC1

6) chain B
residue 98
type
sequence E
description BINDING SITE FOR RESIDUE MN B 321
source : AC2

7) chain B
residue 158
type
sequence E
description BINDING SITE FOR RESIDUE MN B 321
source : AC2

8) chain B
residue 192
type
sequence E
description BINDING SITE FOR RESIDUE MN B 321
source : AC2

9) chain B
residue 195
type
sequence H
description BINDING SITE FOR RESIDUE MN B 321
source : AC2

10) chain B
residue 159
type
sequence S
description BINDING SITE FOR RESIDUE PEO B 322
source : AC3

11) chain B
residue 260
type
sequence K
description BINDING SITE FOR RESIDUE PEO B 322
source : AC3

12) chain C
residue 83
type
sequence N
description BINDING SITE FOR RESIDUE PEO B 322
source : AC3

13) chain C
residue 85
type
sequence N
description BINDING SITE FOR RESIDUE PEO B 322
source : AC3

14) chain B
residue 25
type
sequence R
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

15) chain B
residue 197
type
sequence Y
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

16) chain C
residue 8
type
sequence S
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

17) chain C
residue 9
type
sequence S
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

18) chain C
residue 11
type
sequence S
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

19) chain C
residue 12
type
sequence E
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

20) chain C
residue 13
type
sequence N
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

21) chain C
residue 14
type
sequence T
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

22) chain C
residue 47
type
sequence P
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

23) chain C
residue 48
type
sequence S
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

24) chain C
residue 49
type
sequence Y
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

25) chain C
residue 50
type
sequence G
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

26) chain C
residue 51
type
sequence G
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

27) chain C
residue 82
type
sequence G
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

28) chain C
residue 83
type
sequence N
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

29) chain C
residue 86
type
sequence F
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

30) chain C
residue 89
type
sequence A
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

31) chain C
residue 90
type
sequence Y
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

32) chain C
residue 91
type
sequence G
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

33) chain C
residue 111
type
sequence L
description BINDING SITE FOR RESIDUE FMN C 134
source : AC4

34) chain A
residue 67
type
sequence D
description BINDING SITE FOR RESIDUE MN A 320
source : AC5

35) chain A
residue 98
type
sequence E
description BINDING SITE FOR RESIDUE MN A 320
source : AC5

36) chain A
residue 101
type
sequence H
description BINDING SITE FOR RESIDUE MN A 320
source : AC5

37) chain A
residue 158
type
sequence E
description BINDING SITE FOR RESIDUE MN A 320
source : AC5

38) chain A
residue 192
type
sequence E
description BINDING SITE FOR RESIDUE MN A 320
source : AC5

39) chain A
residue 98
type
sequence E
description BINDING SITE FOR RESIDUE MN A 321
source : AC6

40) chain A
residue 158
type
sequence E
description BINDING SITE FOR RESIDUE MN A 321
source : AC6

41) chain A
residue 192
type
sequence E
description BINDING SITE FOR RESIDUE MN A 321
source : AC6

42) chain A
residue 195
type
sequence H
description BINDING SITE FOR RESIDUE MN A 321
source : AC6

43) chain A
residue 159
type
sequence S
description BINDING SITE FOR RESIDUE PEO A 322
source : AC7

44) chain A
residue 260
type
sequence K
description BINDING SITE FOR RESIDUE PEO A 322
source : AC7

45) chain A
residue 264
type
sequence N
description BINDING SITE FOR RESIDUE PEO A 322
source : AC7

46) chain D
residue 83
type
sequence N
description BINDING SITE FOR RESIDUE PEO A 322
source : AC7

47) chain D
residue 85
type
sequence N
description BINDING SITE FOR RESIDUE PEO A 322
source : AC7

48) chain A
residue 25
type
sequence R
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

49) chain A
residue 197
type
sequence Y
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

50) chain D
residue 8
type
sequence S
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

51) chain D
residue 9
type
sequence S
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

52) chain D
residue 11
type
sequence S
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

53) chain D
residue 12
type
sequence E
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

54) chain D
residue 13
type
sequence N
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

55) chain D
residue 14
type
sequence T
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

56) chain D
residue 47
type
sequence P
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

57) chain D
residue 48
type
sequence S
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

58) chain D
residue 49
type
sequence Y
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

59) chain D
residue 50
type
sequence G
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

60) chain D
residue 81
type
sequence S
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

61) chain D
residue 82
type
sequence G
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

62) chain D
residue 83
type
sequence N
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

63) chain D
residue 86
type
sequence F
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

64) chain D
residue 89
type
sequence A
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

65) chain D
residue 90
type
sequence Y
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

66) chain D
residue 91
type
sequence G
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

67) chain D
residue 111
type
sequence L
description BINDING SITE FOR RESIDUE FMN D 134
source : AC8

68) chain B
residue 192
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI4

69) chain B
residue 195
type BINDING
sequence H
description
source Swiss-Prot : SWS_FT_FI4

70) chain A
residue 192
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI4

71) chain A
residue 195
type BINDING
sequence H
description
source Swiss-Prot : SWS_FT_FI4

72) chain A
residue 105
type ACT_SITE
sequence Y
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU10014
source Swiss-Prot : SWS_FT_FI1

73) chain B
residue 105
type ACT_SITE
sequence Y
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU10014
source Swiss-Prot : SWS_FT_FI1

74) chain A
residue 67
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU10014
source Swiss-Prot : SWS_FT_FI2

75) chain A
residue 101
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU10014
source Swiss-Prot : SWS_FT_FI2

76) chain B
residue 67
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU10014
source Swiss-Prot : SWS_FT_FI2

77) chain B
residue 101
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU10014
source Swiss-Prot : SWS_FT_FI2

78) chain A
residue 98
type BINDING
sequence E
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

79) chain A
residue 158
type BINDING
sequence E
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

80) chain B
residue 98
type BINDING
sequence E
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

81) chain B
residue 158
type BINDING
sequence E
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

82) chain B
residue 97-113
type prosite
sequence MEAVHARSYSSIFSTLC
description RIBORED_SMALL Ribonucleotide reductase small subunit signature. MEa.VHArSYssIfstLC
source prosite : PS00368


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