eF-site ID 3n0b-B
PDB Code 3n0b
Chain B

click to enlarge
Title TM0449 mutant crystals grown in loops/micromounts
Classification TRANSFERASE
Compound Thymidylate synthase thyX
Source Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (THYX_THEMA)
Sequence B:  MKIDILDKGFVELVDVMGNDLSAVRAARVSFDMGLKDEER
DRHLIEYLMKHGHETPFEHIVFTFHVKAPIFVARQWFRHR
IASYNELSGRYSKLSYEFYIPSPERLEGYKTTIPPERVTE
KISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRAFA
TVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPW
TFEAFLKYAYKGDILKEVQV
Description


Functional site

1) chain B
residue 30
type
sequence S
description BINDING SITE FOR RESIDUE FAD D 300
source : AC1

2) chain B
residue 55
type
sequence T
description BINDING SITE FOR RESIDUE FAD D 300
source : AC1

3) chain B
residue 58
type
sequence E
description BINDING SITE FOR RESIDUE FAD D 300
source : AC1

4) chain B
residue 81
type
sequence I
description BINDING SITE FOR RESIDUE FAD D 300
source : AC1

5) chain B
residue 163
type
sequence N
description BINDING SITE FOR RESIDUE FAD D 300
source : AC1

6) chain B
residue 165
type
sequence R
description BINDING SITE FOR RESIDUE FAD D 300
source : AC1

7) chain B
residue 85
type
sequence N
description BINDING SITE FOR RESIDUE FAD C 305
source : AC3

8) chain B
residue 86
type
sequence E
description BINDING SITE FOR RESIDUE FAD C 305
source : AC3

9) chain B
residue 88
type
sequence S
description BINDING SITE FOR RESIDUE FAD C 305
source : AC3

10) chain B
residue 91
type
sequence Y
description BINDING SITE FOR RESIDUE FAD C 305
source : AC3

11) chain B
residue 86
type
sequence E
description BINDING SITE FOR RESIDUE UMP B 308
source : AC4

12) chain B
residue 87
type
sequence L
description BINDING SITE FOR RESIDUE UMP B 308
source : AC4

13) chain B
residue 88
type
sequence S
description BINDING SITE FOR RESIDUE UMP B 308
source : AC4

14) chain B
residue 89
type
sequence G
description BINDING SITE FOR RESIDUE UMP B 308
source : AC4

15) chain B
residue 90
type
sequence R
description BINDING SITE FOR RESIDUE UMP B 308
source : AC4

16) chain B
residue 147
type
sequence R
description BINDING SITE FOR RESIDUE UMP B 308
source : AC4

17) chain B
residue 78
type
sequence R
description BINDING SITE FOR RESIDUE FAD B 310
source : AC5

18) chain B
residue 79
type
sequence H
description BINDING SITE FOR RESIDUE FAD B 310
source : AC5

19) chain B
residue 80
type
sequence R
description BINDING SITE FOR RESIDUE FAD B 310
source : AC5

20) chain B
residue 81
type
sequence I
description BINDING SITE FOR RESIDUE FAD B 310
source : AC5

21) chain B
residue 169
type
sequence N
description BINDING SITE FOR RESIDUE FAD B 310
source : AC5

22) chain B
residue 173
type
sequence L
description BINDING SITE FOR RESIDUE FAD B 310
source : AC5

23) chain B
residue 174
type
sequence R
description BINDING SITE FOR RESIDUE FAD B 310
source : AC5

24) chain B
residue 75
type
sequence Q
description BINDING SITE FOR RESIDUE UMP C 313
source : AC6

25) chain B
residue 78
type
sequence R
description BINDING SITE FOR RESIDUE UMP C 313
source : AC6

26) chain B
residue 174
type
sequence R
description BINDING SITE FOR RESIDUE UMP C 313
source : AC6

27) chain B
residue 55
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:12791256, ECO:0000269|PubMed:19370033, ECO:0000269|PubMed:22477781, ECO:0000269|PubMed:23019356, ECO:0000269|PubMed:24563811, ECO:0000269|PubMed:27214228, ECO:0000269|PubMed:34315871, ECO:0007744|PDB:1O26, ECO:0007744|PDB:3G4A, ECO:0007744|PDB:3N0B, ECO:0007744|PDB:4GTD, ECO:0007744|PDB:4KAS, ECO:0007744|PDB:7NDW
source Swiss-Prot : SWS_FT_FI2

28) chain B
residue 75
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:12791256, ECO:0000269|PubMed:19370033, ECO:0000269|PubMed:22477781, ECO:0000269|PubMed:23019356, ECO:0000269|PubMed:24563811, ECO:0000269|PubMed:27214228, ECO:0007744|PDB:1O26, ECO:0007744|PDB:3G4A, ECO:0007744|PDB:3N0B, ECO:0007744|PDB:4GT9, ECO:0007744|PDB:4KAS
source Swiss-Prot : SWS_FT_FI3

29) chain B
residue 174
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:12791256, ECO:0000269|PubMed:19370033, ECO:0000269|PubMed:22477781, ECO:0000269|PubMed:23019356, ECO:0000269|PubMed:24563811, ECO:0000269|PubMed:27214228, ECO:0007744|PDB:1O26, ECO:0007744|PDB:3G4A, ECO:0007744|PDB:3N0B, ECO:0007744|PDB:4GT9, ECO:0007744|PDB:4KAS
source Swiss-Prot : SWS_FT_FI3

30) chain B
residue 147
type BINDING
sequence R
description in other chain => ECO:0000269|PubMed:12791256, ECO:0000269|PubMed:19370033, ECO:0000269|PubMed:22477781, ECO:0000269|PubMed:23019356, ECO:0000269|PubMed:24563811, ECO:0000269|PubMed:27214228, ECO:0007744|PDB:1O26, ECO:0007744|PDB:3G4A, ECO:0007744|PDB:3N0B, ECO:0007744|PDB:4GT9, ECO:0007744|PDB:4KAS
source Swiss-Prot : SWS_FT_FI5

31) chain B
residue 174
type ACT_SITE
sequence R
description Involved in ionization of N3 of dUMP, leading to its activation => ECO:0000269|PubMed:27214228
source Swiss-Prot : SWS_FT_FI1

32) chain B
residue 78
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:12211025, ECO:0000269|PubMed:12791256, ECO:0000269|PubMed:19370033, ECO:0000269|PubMed:22477781, ECO:0000269|PubMed:23019356, ECO:0000269|PubMed:24563811, ECO:0000269|PubMed:27214228, ECO:0000269|PubMed:34315871, ECO:0007744|PDB:1KQ4, ECO:0007744|PDB:1O26, ECO:0007744|PDB:3G4A, ECO:0007744|PDB:3N0B, ECO:0007744|PDB:4GTD, ECO:0007744|PDB:4KAS, ECO:0007744|PDB:7NDW
source Swiss-Prot : SWS_FT_FI4

33) chain B
residue 86
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:12211025, ECO:0000269|PubMed:12791256, ECO:0000269|PubMed:19370033, ECO:0000269|PubMed:22477781, ECO:0000269|PubMed:23019356, ECO:0000269|PubMed:24563811, ECO:0000269|PubMed:27214228, ECO:0000269|PubMed:34315871, ECO:0007744|PDB:1KQ4, ECO:0007744|PDB:1O26, ECO:0007744|PDB:3G4A, ECO:0007744|PDB:3N0B, ECO:0007744|PDB:4GTD, ECO:0007744|PDB:4KAS, ECO:0007744|PDB:7NDW
source Swiss-Prot : SWS_FT_FI4

34) chain B
residue 163
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:12211025, ECO:0000269|PubMed:12791256, ECO:0000269|PubMed:19370033, ECO:0000269|PubMed:22477781, ECO:0000269|PubMed:23019356, ECO:0000269|PubMed:24563811, ECO:0000269|PubMed:27214228, ECO:0000269|PubMed:34315871, ECO:0007744|PDB:1KQ4, ECO:0007744|PDB:1O26, ECO:0007744|PDB:3G4A, ECO:0007744|PDB:3N0B, ECO:0007744|PDB:4GTD, ECO:0007744|PDB:4KAS, ECO:0007744|PDB:7NDW
source Swiss-Prot : SWS_FT_FI4

35) chain B
residue 169
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:12211025, ECO:0000269|PubMed:12791256, ECO:0000269|PubMed:19370033, ECO:0000269|PubMed:22477781, ECO:0000269|PubMed:23019356, ECO:0000269|PubMed:24563811, ECO:0000269|PubMed:27214228, ECO:0000269|PubMed:34315871, ECO:0007744|PDB:1KQ4, ECO:0007744|PDB:1O26, ECO:0007744|PDB:3G4A, ECO:0007744|PDB:3N0B, ECO:0007744|PDB:4GTD, ECO:0007744|PDB:4KAS, ECO:0007744|PDB:7NDW
source Swiss-Prot : SWS_FT_FI4


Display surface

Download
Links