eF-site ID 3mwt-B
PDB Code 3mwt
Chain B

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Title Crystal structure of Lassa fever virus nucleoprotein in complex with Mn2+
Classification NUCLEAR PROTEIN
Compound Nucleoprotein
Source Lassa virus (strain Mouse/Sierra Leone/Josiah/1976) (LASV) (NCAP_LASSJ)
Sequence B:  KSFLWTQSLRRELSGYCSNIKLQVVKDAQALLHGLDFSEV
SNVQRLMRKERRDDNDLKRLRDLNQAVNNLVELKSTQQKS
ILRVGTLTSDDLLILAADLEKLKSKVIRTERPLSAGVYMG
NLSSQQLDQRRALLNMIGMSDGVVRVWDVKNAELLNNQFG
TMPSLTLACLTKQGQVDLNDAVQALTDLGLIYTAKYPNTS
DLDRLTQSHPILNMIDTKSSLNISGYNFSLGAAVKAGACM
LDGGNMLETIKVSPQTMDGILKSILKVKKALGMFISDTPG
ERNPYENILYKICLSGDGWPYIASRTSITGRAWENTVVDG
LTYSQLMTLKDAMLQLDPNAKTWMDIEGRPEDPVEIALYQ
PSSGCYIHFFREPTDLKQFKQDAKYSHGIDVTDLFATQPG
LTSAVIDALPRNMVITCQGSDDIRKLLESQGRKDIKLIDI
ALSKTDSRKYENAVWDQYKDLCHMHTGVVVEKKEEITPHC
ALMDCIMFDAAVSGGLNTSVLRAVLPRDMVFR
Description


Functional site

1) chain B
residue 389
type
sequence D
description BINDING SITE FOR RESIDUE MN B 680
source : AC3

2) chain B
residue 391
type
sequence E
description BINDING SITE FOR RESIDUE MN B 680
source : AC3

3) chain B
residue 533
type
sequence D
description BINDING SITE FOR RESIDUE MN B 680
source : AC3

4) chain B
residue 399
type
sequence E
description BINDING SITE FOR RESIDUE ZN B 690
source : AC4

5) chain B
residue 412
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 690
source : AC4

6) chain B
residue 506
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 690
source : AC4

7) chain B
residue 509
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 690
source : AC4

8) chain B
residue 529
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 690
source : AC4

9) chain B
residue 389
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117, ECO:0000269|PubMed:21262835
source Swiss-Prot : SWS_FT_FI1

10) chain B
residue 391
type BINDING
sequence E
description BINDING => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117, ECO:0000269|PubMed:21262835
source Swiss-Prot : SWS_FT_FI1

11) chain B
residue 533
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117, ECO:0000269|PubMed:21262835
source Swiss-Prot : SWS_FT_FI1

12) chain B
residue 399
type BINDING
sequence E
description BINDING => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117, ECO:0000269|PubMed:21262835, ECO:0000269|PubMed:22937163, ECO:0000269|PubMed:23615902
source Swiss-Prot : SWS_FT_FI2

13) chain B
residue 506
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117, ECO:0000269|PubMed:21262835, ECO:0000269|PubMed:22937163, ECO:0000269|PubMed:23615902
source Swiss-Prot : SWS_FT_FI2

14) chain B
residue 509
type BINDING
sequence H
description BINDING => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117, ECO:0000269|PubMed:21262835, ECO:0000269|PubMed:22937163, ECO:0000269|PubMed:23615902
source Swiss-Prot : SWS_FT_FI2

15) chain B
residue 529
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117, ECO:0000269|PubMed:21262835, ECO:0000269|PubMed:22937163, ECO:0000269|PubMed:23615902
source Swiss-Prot : SWS_FT_FI2

16) chain B
residue 466
type SITE
sequence D
description Important for exonuclease activity => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117
source Swiss-Prot : SWS_FT_FI3


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