eF-site ID 3mwt-A
PDB Code 3mwt
Chain A

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Title Crystal structure of Lassa fever virus nucleoprotein in complex with Mn2+
Classification NUCLEAR PROTEIN
Compound Nucleoprotein
Source null (NCAP_LASSJ)
Sequence A:  IKSFLWTQSLRRELSGYCSNIKLQVVKDAQALLHGLDFSE
VSNVQRLMRKERRDDNDLKRLRDLNQAVNNLVELKSTQQK
SILRVGTLTSDDLLILAADLEKLKSKVIRTERPLSAGVYM
GNLSSQQLDQRRALLNMIGMDGVVRVWDVKNAELLNNQFG
TMPSLTLACLTKQGQVDLNDAVQALTDLGLIYTAKYPNTS
DLDRLTQSHPILNMIDTKKSSLNISGYNFSLGAAVKAGAC
MLDGGNMLETIKVSPQTMDGILKSILKVKKALGMFISDTP
GERNPYENILYKICLSGDGWPYIASRTSITGRAWENTVVD
LGLTYSQLMTLKDAMLQLDPNAKTWMDIEGRPEDPVEIAL
YQPSSGCYIHFFREPTDLKQFKQDAKYSHGIDVTDLFATQ
PGLTSAVIDALPRNMVITCQGSDDIRKLLESQGRKDIKLI
DIALSKTDSRKYENAVWDQYKDLCHMHTGVVVEKKEEITP
HCALMDCIMFDAAVSGGLTSVLRAVLPRDMVFR
Description


Functional site

1) chain A
residue 389
type
sequence D
description BINDING SITE FOR RESIDUE MN A 680
source : AC1

2) chain A
residue 391
type
sequence E
description BINDING SITE FOR RESIDUE MN A 680
source : AC1

3) chain A
residue 533
type
sequence D
description BINDING SITE FOR RESIDUE MN A 680
source : AC1

4) chain A
residue 399
type
sequence E
description BINDING SITE FOR RESIDUE ZN A 690
source : AC2

5) chain A
residue 412
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 690
source : AC2

6) chain A
residue 506
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 690
source : AC2

7) chain A
residue 509
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 690
source : AC2

8) chain A
residue 529
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 690
source : AC2

9) chain A
residue 509
type BINDING
sequence H
description BINDING => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117, ECO:0000269|PubMed:21262835, ECO:0000269|PubMed:22937163, ECO:0000269|PubMed:23615902
source Swiss-Prot : SWS_FT_FI2

10) chain A
residue 529
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117, ECO:0000269|PubMed:21262835, ECO:0000269|PubMed:22937163, ECO:0000269|PubMed:23615902
source Swiss-Prot : SWS_FT_FI2

11) chain A
residue 399
type BINDING
sequence E
description BINDING => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117, ECO:0000269|PubMed:21262835, ECO:0000269|PubMed:22937163, ECO:0000269|PubMed:23615902
source Swiss-Prot : SWS_FT_FI2

12) chain A
residue 506
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117, ECO:0000269|PubMed:21262835, ECO:0000269|PubMed:22937163, ECO:0000269|PubMed:23615902
source Swiss-Prot : SWS_FT_FI2

13) chain A
residue 466
type SITE
sequence D
description Important for exonuclease activity => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117
source Swiss-Prot : SWS_FT_FI3

14) chain A
residue 389
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117, ECO:0000269|PubMed:21262835
source Swiss-Prot : SWS_FT_FI1

15) chain A
residue 391
type BINDING
sequence E
description BINDING => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117, ECO:0000269|PubMed:21262835
source Swiss-Prot : SWS_FT_FI1

16) chain A
residue 533
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_04085, ECO:0000269|PubMed:21085117, ECO:0000269|PubMed:21262835
source Swiss-Prot : SWS_FT_FI1


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