eF-site ID 3mks-B
PDB Code 3mks
Chain B

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Title Crystal Structure of yeast Cdc4/Skp1 in complex with an allosteric inhibitor SCF-I2
Classification LIGASE/CELL CYCLE
Compound Suppressor of kinetochore protein 1
Source (CDC4_YEAST)
Sequence B:  LKRDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKII
RKSTSLWKKLLISENFVSPKGFNSLNLKLSQKYPKLSQQD
RLRLSFLENIFILKNWYNPKFVPQRTTLRGHMTSVITCLQ
FEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALK
YAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCL
DIVEYKNIKYIVTGSRDNTLHVWKLPKDYPLVFHTPEENP
YFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQM
KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE
NGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDAN
DYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLR
SGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEI
LDFS
Description


Functional site

1) chain B
residue 280
type
sequence F
description BINDING SITE FOR RESIDUE SO4 B 1
source : AC1

2) chain B
residue 311
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 1
source : AC1

3) chain B
residue 312
type
sequence S
description BINDING SITE FOR RESIDUE SO4 B 1
source : AC1

4) chain B
residue 314
type
sequence S
description BINDING SITE FOR RESIDUE SO4 B 1
source : AC1

5) chain B
residue 280
type
sequence F
description BINDING SITE FOR RESIDUE SO4 B 3
source : AC2

6) chain B
residue 389
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 B 4
source : AC3

7) chain B
residue 639
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 4
source : AC3

8) chain B
residue 720
type
sequence N
description BINDING SITE FOR RESIDUE SO4 B 4
source : AC3

9) chain B
residue 706
type
sequence H
description BINDING SITE FOR RESIDUE SO4 B 6
source : AC4

10) chain B
residue 707
type
sequence A
description BINDING SITE FOR RESIDUE SO4 B 6
source : AC4

11) chain B
residue 708
type
sequence N
description BINDING SITE FOR RESIDUE SO4 B 6
source : AC4

12) chain B
residue 709
type
sequence I
description BINDING SITE FOR RESIDUE SO4 B 6
source : AC4

13) chain B
residue 365
type
sequence W
description BINDING SITE FOR RESIDUE SO4 B 7
source : AC5

14) chain B
residue 682
type
sequence S
description BINDING SITE FOR RESIDUE SO4 B 7
source : AC5

15) chain B
residue 685
type
sequence I
description BINDING SITE FOR RESIDUE SO4 B 7
source : AC5

16) chain B
residue 721
type
sequence F
description BINDING SITE FOR RESIDUE SO4 B 7
source : AC5

17) chain B
residue 723
type
sequence G
description BINDING SITE FOR RESIDUE SO4 B 7
source : AC5

18) chain B
residue 436-450
type prosite
sequence LVSGSTDRTVRVWDI
description WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVSGstDrTVRVWDI
source prosite : PS00678

19) chain B
residue 543-557
type prosite
sequence VVSGSYDNTLIVWDV
description WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVSGstDrTVRVWDI
source prosite : PS00678

20) chain B
residue 585-599
type prosite
sequence CISASMDTTIRIWDL
description WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVSGstDrTVRVWDI
source prosite : PS00678

21) chain B
residue 645-659
type prosite
sequence LVSAAADGSIRGWDA
description WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVSGstDrTVRVWDI
source prosite : PS00678


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