eF-site ID 3mi5-M
PDB Code 3mi5
Chain M

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Title Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
Classification OXIDOREDUCTASE
Compound Protocatechuate 3,4-dioxygenase alpha chain
Source Pseudomonas putida (Arthrobacter siderocapsulatus) (PCXB_PSEPU)
Sequence M:  PAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIP
QSISETTGPNFSHLGFGAHDHDLLLNFNNGGLPIGERIIV
AGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLD
PNFGGVGRCLTDSDGYYSFRTIKPGPHPWRNGPNDWRPAH
IYFGISGPSIATKLITQLYFEGDPLIPMCPIVKSIANPEA
VQQLIAKLDMNNANPMDCLAYRFDIVLRGQRKTHFENC
Description


Functional site

1) chain M
residue 366
type
sequence N
description BINDING SITE FOR RESIDUE GOL A 206
source : AC6

2) chain M
residue 367
type
sequence F
description BINDING SITE FOR RESIDUE GOL A 206
source : AC6

3) chain M
residue 424
type
sequence G
description BINDING SITE FOR RESIDUE GOL A 206
source : AC6

4) chain M
residue 426
type
sequence V
description BINDING SITE FOR RESIDUE GOL A 206
source : AC6

5) chain M
residue 408
type
sequence Y
description BINDING SITE FOR RESIDUE FE M 600
source : AC9

6) chain M
residue 447
type
sequence H
description BINDING SITE FOR RESIDUE FE M 600
source : AC9

7) chain M
residue 460
type
sequence H
description BINDING SITE FOR RESIDUE FE M 600
source : AC9

8) chain M
residue 462
type
sequence Y
description BINDING SITE FOR RESIDUE FE M 600
source : AC9

9) chain M
residue 503
type
sequence Q
description BINDING SITE FOR RESIDUE GOL M 12
source : BC1

10) chain M
residue 505
type
sequence I
description BINDING SITE FOR RESIDUE GOL M 12
source : BC1

11) chain M
residue 522
type
sequence R
description BINDING SITE FOR RESIDUE GOL M 12
source : BC1

12) chain M
residue 523
type
sequence F
description BINDING SITE FOR RESIDUE GOL M 12
source : BC1

13) chain M
residue 524
type
sequence D
description BINDING SITE FOR RESIDUE GOL M 12
source : BC1

14) chain M
residue 407
type
sequence R
description BINDING SITE FOR RESIDUE GOL M 16
source : BC2

15) chain M
residue 419
type
sequence L
description BINDING SITE FOR RESIDUE GOL M 16
source : BC2

16) chain M
residue 409
type
sequence R
description BINDING SITE FOR RESIDUE BME M 28
source : BC3

17) chain M
residue 421
type
sequence P
description BINDING SITE FOR RESIDUE BME M 28
source : BC3

18) chain M
residue 515
type
sequence P
description BINDING SITE FOR RESIDUE BME M 30
source : BC4

19) chain M
residue 333
type
sequence R
description BINDING SITE FOR RESIDUE GOL M 10
source : BC5

20) chain M
residue 450
type
sequence R
description BINDING SITE FOR RESIDUE GOL M 14
source : BC6

21) chain M
residue 453
type
sequence P
description BINDING SITE FOR RESIDUE GOL M 14
source : BC6

22) chain M
residue 413
type
sequence D
description BINDING SITE FOR RESIDUE BME M 1
source : BC7

23) chain M
residue 447
type
sequence H
description BINDING SITE FOR RESIDUE BME M 1
source : BC7

24) chain M
residue 448
type
sequence P
description BINDING SITE FOR RESIDUE BME M 1
source : BC7

25) chain M
residue 449
type
sequence W
description BINDING SITE FOR RESIDUE BME M 1
source : BC7

26) chain M
residue 450
type
sequence R
description BINDING SITE FOR RESIDUE BME M 1
source : BC7

27) chain M
residue 516
type
sequence M
description BINDING SITE FOR RESIDUE BME M 1
source : BC7

28) chain M
residue 432
type
sequence D
description BINDING SITE FOR RESIDUE CL M 2
source : BC8

29) chain M
residue 433
type
sequence S
description BINDING SITE FOR RESIDUE CL M 2
source : BC8

30) chain M
residue 408
type
sequence Y
description BINDING SITE FOR RESIDUE CAQ M 539
source : BC9

31) chain M
residue 447
type
sequence H
description BINDING SITE FOR RESIDUE CAQ M 539
source : BC9

32) chain M
residue 449
type
sequence W
description BINDING SITE FOR RESIDUE CAQ M 539
source : BC9

33) chain M
residue 457
type
sequence R
description BINDING SITE FOR RESIDUE CAQ M 539
source : BC9

34) chain M
residue 460
type
sequence H
description BINDING SITE FOR RESIDUE CAQ M 539
source : BC9

35) chain M
residue 462
type
sequence Y
description BINDING SITE FOR RESIDUE CAQ M 539
source : BC9

36) chain M
residue 356
type
sequence F
description BINDING SITE FOR RESIDUE BME M 540
source : CC1

37) chain M
residue 429
type
sequence C
description BINDING SITE FOR RESIDUE BME M 540
source : CC1

38) chain M
residue 430
type
sequence L
description BINDING SITE FOR RESIDUE BME M 540
source : CC1

39) chain M
residue 338
type
sequence S
description BINDING SITE FOR RESIDUE BME N 8
source : DC4

40) chain M
residue 340
type
sequence P
description BINDING SITE FOR RESIDUE BME N 8
source : DC4

41) chain M
residue 328
type
sequence I
description BINDING SITE FOR RESIDUE GOL O 539
source : FC3

42) chain M
residue 390
type
sequence K
description BINDING SITE FOR RESIDUE SO4 Q 539
source : JC2

43) chain M
residue 408
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:7990141
source Swiss-Prot : SWS_FT_FI1

44) chain M
residue 447
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:7990141
source Swiss-Prot : SWS_FT_FI1

45) chain M
residue 460
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:7990141
source Swiss-Prot : SWS_FT_FI1

46) chain M
residue 462
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:7990141
source Swiss-Prot : SWS_FT_FI1

47) chain M
residue 408
type catalytic
sequence Y
description 936
source MCSA : MCSA1

48) chain M
residue 447
type catalytic
sequence H
description 936
source MCSA : MCSA1

49) chain M
residue 457
type catalytic
sequence R
description 936
source MCSA : MCSA1

50) chain M
residue 460
type catalytic
sequence H
description 936
source MCSA : MCSA1

51) chain M
residue 462
type catalytic
sequence Y
description 936
source MCSA : MCSA1

52) chain M
residue 380-408
type prosite
sequence VAGRVVDQYGKPVPNTLVEMWQANAGGRY
description INTRADIOL_DIOXYGENAS Intradiol ring-cleavage dioxygenases signature. LlGqVydgnGhlVrdsfLEVwqadanGeY
source prosite : PS00083


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