eF-site ID 3md3-A
PDB Code 3md3
Chain A

click to enlarge
Title Crystal Structure of the First Two RRM Domains of Yeast Poly(U) Binding Protein (Pub1)
Classification RNA BINDING PROTEIN
Compound Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
Source ORGANISM_COMMON: yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae;
Sequence A:  RVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNKNV
NYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQ
SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMW
DMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRI
NWAAK
Description


Functional site

1) chain A
residue 81
type
sequence N
description BINDING SITE FOR RESIDUE SO4 A 1
source : AC1

2) chain A
residue 143
type
sequence N
description BINDING SITE FOR RESIDUE SO4 A 1
source : AC1

3) chain A
residue 144
type
sequence I
description BINDING SITE FOR RESIDUE SO4 A 1
source : AC1

4) chain A
residue 146
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 2
source : AC2

5) chain A
residue 179
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 2
source : AC2

6) chain A
residue 183
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 2
source : AC2

7) chain A
residue 148
type
sequence N
description BINDING SITE FOR RESIDUE SO4 A 3
source : AC3

8) chain A
residue 149
type
sequence W
description BINDING SITE FOR RESIDUE SO4 A 3
source : AC3

9) chain A
residue 156
type
sequence S
description BINDING SITE FOR RESIDUE SO4 A 3
source : AC3

10) chain A
residue 192
type
sequence H
description BINDING SITE FOR RESIDUE SO4 A 3
source : AC3

11) chain A
residue 126
type
sequence H
description BINDING SITE FOR RESIDUE SO4 A 4
source : AC4

12) chain A
residue 129
type
sequence N
description BINDING SITE FOR RESIDUE SO4 A 4
source : AC4

13) chain A
residue 231
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 5
source : AC5

14) chain A
residue 75
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 6
source : AC6

15) chain A
residue 124
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 A 6
source : AC6

16) chain A
residue 125
type
sequence S
description BINDING SITE FOR RESIDUE SO4 A 6
source : AC6

17) chain A
residue 212
type
sequence S
description BINDING SITE FOR RESIDUE SO4 A 7
source : AC7

18) chain A
residue 213
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 A 7
source : AC7

19) chain A
residue 214
type
sequence D
description BINDING SITE FOR RESIDUE SO4 A 7
source : AC7

20) chain A
residue 177
type
sequence T
description BINDING SITE FOR RESIDUE SO4 A 8
source : AC8

21) chain A
residue 180
type
sequence N
description BINDING SITE FOR RESIDUE SO4 A 8
source : AC8

22) chain A
residue 119
type
sequence F
description BINDING SITE FOR RESIDUE GOL A 241
source : AC9

23) chain A
residue 152
type
sequence Q
description BINDING SITE FOR RESIDUE GOL A 241
source : AC9

24) chain A
residue 196
type
sequence D
description BINDING SITE FOR RESIDUE GOL A 241
source : AC9

25) chain A
residue 154
type
sequence Q
description BINDING SITE FOR RESIDUE GOL A 242
source : BC1

26) chain A
residue 155
type
sequence Q
description BINDING SITE FOR RESIDUE GOL A 242
source : BC1

27) chain A
residue 196
type
sequence D
description BINDING SITE FOR RESIDUE GOL A 242
source : BC1

28) chain A
residue 203
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 242
source : BC1

29) chain A
residue 169
type
sequence L
description BINDING SITE FOR RESIDUE GOL A 243
source : BC2

30) chain A
residue 204
type
sequence G
description BINDING SITE FOR RESIDUE GOL A 243
source : BC2

31) chain A
residue 231
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 243
source : BC2

32) chain A
residue 239
type
sequence A
description BINDING SITE FOR RESIDUE GOL A 243
source : BC2

33) chain A
residue 155
type
sequence Q
description BINDING SITE FOR RESIDUE GOL A 244
source : BC3

34) chain A
residue 163
type
sequence N
description BINDING SITE FOR RESIDUE GOL A 244
source : BC3

35) chain A
residue 203
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 244
source : BC3

36) chain A
residue 205
type
sequence Y
description BINDING SITE FOR RESIDUE GOL A 244
source : BC3

37) chain A
residue 129
type
sequence N
description BINDING SITE FOR RESIDUE GOL A 246
source : BC4

38) chain A
residue 136
type
sequence N
description BINDING SITE FOR RESIDUE GOL A 247
source : BC5

39) chain A
residue 146
type
sequence K
description BINDING SITE FOR RESIDUE GOL A 247
source : BC5

40) chain A
residue 147
type
sequence I
description BINDING SITE FOR RESIDUE GOL A 247
source : BC5

41) chain A
residue 148
type
sequence N
description BINDING SITE FOR RESIDUE GOL A 247
source : BC5

42) chain A
residue 231
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 248
source : BC6

43) chain A
residue 232
type
sequence P
description BINDING SITE FOR RESIDUE GOL A 248
source : BC6

44) chain A
residue 240
type
sequence K
description BINDING SITE FOR RESIDUE GOL A 248
source : BC6


Display surface

Download
Links