eF-site ID 3km5-AB PDB Code 3km5 Chain A, B click to enlarge Title Crystal Structure Analysis of the K2 Cleaved Adhesin Domain of Lys-gingipain (Kgp) Classification CELL INVASION Compound Lysine specific cysteine protease Source (O52050_PORGI) Sequence A:  GSADFTETFESSTHGEAPAEWTTIDADGDGQGWLCLSSGQ LDWLTAHGGSNVVSSFSWNGMALNPDNYLISKDVTGATKV KYYYAVNDGFPGDHYAVMISKTGTNAGDFTVVFEETPNGI NKGGARFGLSTEANGAKPQSVWIERTVDLPAGTKYVAFRH YNCSDLNYILLDDIQFTMG B:  ADFTETFESSTHGEAPAEWTTIDADGDGQGWLCLSSGQLD WLTAHGGSNVVSSFSWNGMALNPDNYLISKDVTGATKVKY YYAVNDGFPGDHYAVMISKTGTNAGDFTVVFEETPNGINK GGARFGLSTEAKPQSVWIERTVDLPAGTKYVAFRHYNCSD LNYILLDDIQFTM Description Functional site 1) chain A residue 1179 type sequence D description BINDING SITE FOR RESIDUE CA A 2011 source : AC1 2) chain A residue 1181 type sequence D description BINDING SITE FOR RESIDUE CA A 2011 source : AC1 3) chain A residue 1183 type sequence D description BINDING SITE FOR RESIDUE CA A 2011 source : AC1 4) chain A residue 1185 type sequence Q description BINDING SITE FOR RESIDUE CA A 2011 source : AC1 5) chain A residue 1221 type sequence N description BINDING SITE FOR RESIDUE CA A 2011 source : AC1 6) chain A residue 1162 type sequence T description BINDING SITE FOR RESIDUE CA A 2012 source : AC2 7) chain A residue 1164 type sequence E description BINDING SITE FOR RESIDUE CA A 2012 source : AC2 8) chain A residue 1202 type sequence G description BINDING SITE FOR RESIDUE CA A 2012 source : AC2 9) chain A residue 1205 type sequence N description BINDING SITE FOR RESIDUE CA A 2012 source : AC2 10) chain A residue 1326 type sequence D description BINDING SITE FOR RESIDUE CA A 2012 source : AC2 11) chain A residue 1161 type sequence E description BINDING SITE FOR RESIDUE SO4 A 2022 source : AC3 12) chain A residue 1162 type sequence T description BINDING SITE FOR RESIDUE SO4 A 2022 source : AC3 13) chain A residue 1163 type sequence F description BINDING SITE FOR RESIDUE SO4 A 2022 source : AC3 14) chain A residue 1164 type sequence E description BINDING SITE FOR RESIDUE SO4 A 2022 source : AC3 15) chain A residue 1165 type sequence S description BINDING SITE FOR RESIDUE SO4 A 2022 source : AC3 16) chain B residue 1218 type sequence N description BINDING SITE FOR RESIDUE SO4 A 2022 source : AC3 17) chain A residue 1184 type sequence G description BINDING SITE FOR RESIDUE NO3 A 2021 source : AC4 18) chain A residue 1185 type sequence Q description BINDING SITE FOR RESIDUE NO3 A 2021 source : AC4 19) chain A residue 1186 type sequence G description BINDING SITE FOR RESIDUE NO3 A 2021 source : AC4 20) chain A residue 1188 type sequence L description BINDING SITE FOR RESIDUE NO3 A 2021 source : AC4 21) chain A residue 1299 type sequence R description BINDING SITE FOR RESIDUE NO3 A 2021 source : AC4 22) chain A residue 1300 type sequence T description BINDING SITE FOR RESIDUE NO3 A 2021 source : AC4 23) chain B residue 1197 type sequence W description BINDING SITE FOR RESIDUE GOL B 2001 source : AC5 24) chain B residue 1198 type sequence L description BINDING SITE FOR RESIDUE GOL B 2001 source : AC5 25) chain B residue 1199 type sequence T description BINDING SITE FOR RESIDUE GOL B 2001 source : AC5 26) chain B residue 1239 type sequence A description BINDING SITE FOR RESIDUE GOL B 2001 source : AC5 27) chain B residue 1240 type sequence V description BINDING SITE FOR RESIDUE GOL B 2001 source : AC5 28) chain B residue 1293 type sequence Q description BINDING SITE FOR RESIDUE GOL B 2001 source : AC5 29) chain B residue 1294 type sequence S description BINDING SITE FOR RESIDUE GOL B 2001 source : AC5 30) chain B residue 1296 type sequence W description BINDING SITE FOR RESIDUE GOL B 2001 source : AC5 31) chain B residue 1322 type sequence Y description BINDING SITE FOR RESIDUE GOL B 2001 source : AC5 32) chain B residue 1179 type sequence D description BINDING SITE FOR RESIDUE CA B 2011 source : AC6 33) chain B residue 1181 type sequence D description BINDING SITE FOR RESIDUE CA B 2011 source : AC6 34) chain B residue 1183 type sequence D description BINDING SITE FOR RESIDUE CA B 2011 source : AC6 35) chain B residue 1185 type sequence Q description BINDING SITE FOR RESIDUE CA B 2011 source : AC6 36) chain B residue 1221 type sequence N description BINDING SITE FOR RESIDUE CA B 2011 source : AC6 37) chain B residue 1162 type sequence T description BINDING SITE FOR RESIDUE CA B 2012 source : AC7 38) chain B residue 1164 type sequence E description BINDING SITE FOR RESIDUE CA B 2012 source : AC7 39) chain B residue 1202 type sequence G description BINDING SITE FOR RESIDUE CA B 2012 source : AC7 40) chain B residue 1205 type sequence N description BINDING SITE FOR RESIDUE CA B 2012 source : AC7 41) chain B residue 1326 type sequence D description BINDING SITE FOR RESIDUE CA B 2012 source : AC7 42) chain B residue 1184 type sequence G description BINDING SITE FOR RESIDUE NO3 B 2021 source : AC8 43) chain B residue 1185 type sequence Q description BINDING SITE FOR RESIDUE NO3 B 2021 source : AC8 44) chain B residue 1186 type sequence G description BINDING SITE FOR RESIDUE NO3 B 2021 source : AC8 45) chain B residue 1188 type sequence L description BINDING SITE FOR RESIDUE NO3 B 2021 source : AC8 46) chain B residue 1298 type sequence E description BINDING SITE FOR RESIDUE NO3 B 2021 source : AC8 47) chain B residue 1299 type sequence R description BINDING SITE FOR RESIDUE NO3 B 2021 source : AC8 48) chain B residue 1300 type sequence T description BINDING SITE FOR RESIDUE NO3 B 2021 source : AC8 49) chain A residue 1291 type SITE sequence K description Cleavage; site 4 => ECO:0000269|PubMed:9245829 source Swiss-Prot : SWS_FT_FI1 50) chain B residue 1291 type SITE sequence K description Cleavage; site 4 => ECO:0000269|PubMed:9245829 source Swiss-Prot : SWS_FT_FI1

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