eF-site ID 3khr-ABDEHJ PDB Code 3khr Chain A, B, D, E, H, J click to enlarge Title Dpo4 post-extension ternary complex with the correct C opposite the 2-aminofluorene-guanine [AF]G lesion Classification TRANSFERASE/DNA Compound DNA polymerase IV Source Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (3KHR) Sequence A:  GIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDS GAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYRE AYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGIN KLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRI PKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFI B:  GIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDS GAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYRE AYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGIN KLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRI PKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFI D:  TTGGATGGTAGCX E:  TAACGCTACCATCCAAC H:  TTGGATGGTAGCX J:  CTAACGCTACCATCCAAC Description Functional site 1) chain A residue 7 type sequence D description BINDING SITE FOR RESIDUE TTP A 414 source : AC1 2) chain A residue 8 type sequence F description BINDING SITE FOR RESIDUE TTP A 414 source : AC1 3) chain A residue 10 type sequence Y description BINDING SITE FOR RESIDUE TTP A 414 source : AC1 4) chain A residue 11 type sequence F description BINDING SITE FOR RESIDUE TTP A 414 source : AC1 5) chain A residue 12 type sequence Y description BINDING SITE FOR RESIDUE TTP A 414 source : AC1 6) chain A residue 44 type sequence A description BINDING SITE FOR RESIDUE TTP A 414 source : AC1 7) chain A residue 45 type sequence T description BINDING SITE FOR RESIDUE TTP A 414 source : AC1 8) chain A residue 48 type sequence Y description BINDING SITE FOR RESIDUE TTP A 414 source : AC1 9) chain A residue 51 type sequence R description BINDING SITE FOR RESIDUE TTP A 414 source : AC1 10) chain A residue 57 type sequence A description BINDING SITE FOR RESIDUE TTP A 414 source : AC1 11) chain A residue 105 type sequence D description BINDING SITE FOR RESIDUE TTP A 414 source : AC1 12) chain A residue 159 type sequence K description BINDING SITE FOR RESIDUE TTP A 414 source : AC1 13) chain D residue 815 type sequence X description BINDING SITE FOR RESIDUE TTP A 414 source : AC1 14) chain E residue 904 type sequence A description BINDING SITE FOR RESIDUE TTP A 414 source : AC1 15) chain A residue 7 type sequence D description BINDING SITE FOR RESIDUE CA A 415 source : AC2 16) chain A residue 105 type sequence D description BINDING SITE FOR RESIDUE CA A 415 source : AC2 17) chain A residue 106 type sequence E description BINDING SITE FOR RESIDUE CA A 415 source : AC2 18) chain D residue 815 type sequence X description BINDING SITE FOR RESIDUE CA A 415 source : AC2 19) chain A residue 7 type sequence D description BINDING SITE FOR RESIDUE CA A 416 source : AC3 20) chain A residue 8 type sequence F description BINDING SITE FOR RESIDUE CA A 416 source : AC3 21) chain A residue 105 type sequence D description BINDING SITE FOR RESIDUE CA A 416 source : AC3 22) chain A residue 181 type sequence A description BINDING SITE FOR RESIDUE CA A 417 source : AC4 23) chain A residue 186 type sequence I description BINDING SITE FOR RESIDUE CA A 417 source : AC4 24) chain A residue 247 type sequence R description BINDING SITE FOR RESIDUE AF E 926 source : AC5 25) chain A residue 248 type sequence I description BINDING SITE FOR RESIDUE AF E 926 source : AC5 26) chain A residue 285 type sequence H description BINDING SITE FOR RESIDUE AF E 926 source : AC5 27) chain A residue 287 type sequence V description BINDING SITE FOR RESIDUE AF E 926 source : AC5 28) chain A residue 335 type sequence V description BINDING SITE FOR RESIDUE AF E 926 source : AC5 29) chain A residue 336 type sequence R description BINDING SITE FOR RESIDUE AF E 926 source : AC5 30) chain E residue 905 type sequence C description BINDING SITE FOR RESIDUE AF E 926 source : AC5 31) chain E residue 906 type sequence G description BINDING SITE FOR RESIDUE AF E 926 source : AC5 32) chain E residue 907 type sequence C description BINDING SITE FOR RESIDUE AF E 926 source : AC5 33) chain B residue 1007 type sequence D description BINDING SITE FOR RESIDUE TTP B 1414 source : AC6 34) chain B residue 1008 type sequence F description BINDING SITE FOR RESIDUE TTP B 1414 source : AC6 35) chain B residue 1009 type sequence D description BINDING SITE FOR RESIDUE TTP B 1414 source : AC6 36) chain B residue 1010 type sequence Y description BINDING SITE FOR RESIDUE TTP B 1414 source : AC6 37) chain B residue 1011 type sequence F description BINDING SITE FOR RESIDUE TTP B 1414 source : AC6 38) chain B residue 1012 type sequence Y description BINDING SITE FOR RESIDUE TTP B 1414 source : AC6 39) chain B residue 1044 type sequence A description BINDING SITE FOR RESIDUE TTP B 1414 source : AC6 40) chain B residue 1045 type sequence T description BINDING SITE FOR RESIDUE TTP B 1414 source : AC6 41) chain B residue 1048 type sequence Y description BINDING SITE FOR RESIDUE TTP B 1414 source : AC6 42) chain B residue 1051 type sequence R description BINDING SITE FOR RESIDUE TTP B 1414 source : AC6 43) chain B residue 1057 type sequence A description BINDING SITE FOR RESIDUE TTP B 1414 source : AC6 44) chain B residue 1105 type sequence D description BINDING SITE FOR RESIDUE TTP B 1414 source : AC6 45) chain B residue 1159 type sequence K description BINDING SITE FOR RESIDUE TTP B 1414 source : AC6 46) chain H residue 1815 type sequence X description BINDING SITE FOR RESIDUE TTP B 1414 source : AC6 47) chain J residue 1904 type sequence A description BINDING SITE FOR RESIDUE TTP B 1414 source : AC6 48) chain B residue 1007 type sequence D description BINDING SITE FOR RESIDUE CA B 1415 source : AC7 49) chain B residue 1106 type sequence E description BINDING SITE FOR RESIDUE CA B 1415 source : AC7 50) chain B residue 1152 type sequence K description BINDING SITE FOR RESIDUE CA B 1415 source : AC7 51) chain H residue 1815 type sequence X description BINDING SITE FOR RESIDUE CA B 1415 source : AC7 52) chain B residue 1007 type sequence D description BINDING SITE FOR RESIDUE CA B 1416 source : AC8 53) chain B residue 1008 type sequence F description BINDING SITE FOR RESIDUE CA B 1416 source : AC8 54) chain B residue 1105 type sequence D description BINDING SITE FOR RESIDUE CA B 1416 source : AC8 55) chain B residue 1181 type sequence A description BINDING SITE FOR RESIDUE CA B 1417 source : AC9 56) chain B residue 1186 type sequence I description BINDING SITE FOR RESIDUE CA B 1417 source : AC9 57) chain B residue 1248 type sequence I description BINDING SITE FOR RESIDUE AF J 1926 source : BC1 58) chain B residue 1285 type sequence H description BINDING SITE FOR RESIDUE AF J 1926 source : BC1 59) chain B residue 1287 type sequence V description BINDING SITE FOR RESIDUE AF J 1926 source : BC1 60) chain B residue 1335 type sequence V description BINDING SITE FOR RESIDUE AF J 1926 source : BC1 61) chain B residue 1336 type sequence R description BINDING SITE FOR RESIDUE AF J 1926 source : BC1 62) chain J residue 1905 type sequence C description BINDING SITE FOR RESIDUE AF J 1926 source : BC1 63) chain J residue 1906 type sequence G description BINDING SITE FOR RESIDUE AF J 1926 source : BC1 64) chain J residue 1907 type sequence C description BINDING SITE FOR RESIDUE AF J 1926 source : BC1 65) chain A residue 7 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI2 66) chain A residue 105 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI2 67) chain B residue 1007 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI2 68) chain B residue 1105 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI2 69) chain A residue 106 type ACT_SITE sequence E description source Swiss-Prot : SWS_FT_FI1 70) chain B residue 1106 type ACT_SITE sequence E description source Swiss-Prot : SWS_FT_FI1 71) chain A residue 12 type SITE sequence Y description Substrate discrimination source Swiss-Prot : SWS_FT_FI3 72) chain B residue 1012 type SITE sequence Y description Substrate discrimination source Swiss-Prot : SWS_FT_FI3

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