eF-site ID 3khl-A
PDB Code 3khl
Chain A

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Title Dpo4 post-extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesion
Classification TRANSFERASE/DNA
Compound DNA polymerase IV
Source null (3KHL)
Sequence A:  GIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDS
GAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV
YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYRE
AYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP
NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGIN
KLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR
VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRI
PKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ
KILEEDERKIRRIGVRFSKFI
Description


Functional site

1) chain A
residue 7
type
sequence D
description BINDING SITE FOR RESIDUE TTP A 414
source : AC1

2) chain A
residue 8
type
sequence F
description BINDING SITE FOR RESIDUE TTP A 414
source : AC1

3) chain A
residue 10
type
sequence Y
description BINDING SITE FOR RESIDUE TTP A 414
source : AC1

4) chain A
residue 11
type
sequence F
description BINDING SITE FOR RESIDUE TTP A 414
source : AC1

5) chain A
residue 12
type
sequence Y
description BINDING SITE FOR RESIDUE TTP A 414
source : AC1

6) chain A
residue 44
type
sequence A
description BINDING SITE FOR RESIDUE TTP A 414
source : AC1

7) chain A
residue 45
type
sequence T
description BINDING SITE FOR RESIDUE TTP A 414
source : AC1

8) chain A
residue 48
type
sequence Y
description BINDING SITE FOR RESIDUE TTP A 414
source : AC1

9) chain A
residue 51
type
sequence R
description BINDING SITE FOR RESIDUE TTP A 414
source : AC1

10) chain A
residue 57
type
sequence A
description BINDING SITE FOR RESIDUE TTP A 414
source : AC1

11) chain A
residue 105
type
sequence D
description BINDING SITE FOR RESIDUE TTP A 414
source : AC1

12) chain A
residue 159
type
sequence K
description BINDING SITE FOR RESIDUE TTP A 414
source : AC1

13) chain A
residue 7
type
sequence D
description BINDING SITE FOR RESIDUE CA A 415
source : AC2

14) chain A
residue 105
type
sequence D
description BINDING SITE FOR RESIDUE CA A 415
source : AC2

15) chain A
residue 106
type
sequence E
description BINDING SITE FOR RESIDUE CA A 415
source : AC2

16) chain A
residue 7
type
sequence D
description BINDING SITE FOR RESIDUE CA A 416
source : AC3

17) chain A
residue 8
type
sequence F
description BINDING SITE FOR RESIDUE CA A 416
source : AC3

18) chain A
residue 105
type
sequence D
description BINDING SITE FOR RESIDUE CA A 416
source : AC3

19) chain A
residue 181
type
sequence A
description BINDING SITE FOR RESIDUE CA A 417
source : AC4

20) chain A
residue 186
type
sequence I
description BINDING SITE FOR RESIDUE CA A 417
source : AC4

21) chain A
residue 248
type
sequence I
description BINDING SITE FOR RESIDUE AF E 926
source : AC5

22) chain A
residue 285
type
sequence H
description BINDING SITE FOR RESIDUE AF E 926
source : AC5

23) chain A
residue 287
type
sequence V
description BINDING SITE FOR RESIDUE AF E 926
source : AC5

24) chain A
residue 335
type
sequence V
description BINDING SITE FOR RESIDUE AF E 926
source : AC5

25) chain A
residue 336
type
sequence R
description BINDING SITE FOR RESIDUE AF E 926
source : AC5

26) chain A
residue 106
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1

27) chain A
residue 7
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

28) chain A
residue 105
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

29) chain A
residue 12
type SITE
sequence Y
description Substrate discrimination
source Swiss-Prot : SWS_FT_FI3


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