eF-site ID 3khg-B
PDB Code 3khg
Chain B

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Title Dpo4 extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesion
Classification TRANSFERASE/DNA
Compound DNA polymerase IV
Source Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (3KHG)
Sequence B:  GIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDS
GAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV
YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYRE
AYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP
NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGIN
KLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR
VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRI
PKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ
KILEEDERKIRRIGVRFSKFI
Description


Functional site

1) chain B
residue 1007
type
sequence D
description BINDING SITE FOR RESIDUE DGT B 1414
source : AC6

2) chain B
residue 1009
type
sequence D
description BINDING SITE FOR RESIDUE DGT B 1414
source : AC6

3) chain B
residue 1010
type
sequence Y
description BINDING SITE FOR RESIDUE DGT B 1414
source : AC6

4) chain B
residue 1032
type
sequence V
description BINDING SITE FOR RESIDUE DGT B 1414
source : AC6

5) chain B
residue 1044
type
sequence A
description BINDING SITE FOR RESIDUE DGT B 1414
source : AC6

6) chain B
residue 1045
type
sequence T
description BINDING SITE FOR RESIDUE DGT B 1414
source : AC6

7) chain B
residue 1048
type
sequence Y
description BINDING SITE FOR RESIDUE DGT B 1414
source : AC6

8) chain B
residue 1051
type
sequence R
description BINDING SITE FOR RESIDUE DGT B 1414
source : AC6

9) chain B
residue 1057
type
sequence A
description BINDING SITE FOR RESIDUE DGT B 1414
source : AC6

10) chain B
residue 1058
type
sequence G
description BINDING SITE FOR RESIDUE DGT B 1414
source : AC6

11) chain B
residue 1105
type
sequence D
description BINDING SITE FOR RESIDUE DGT B 1414
source : AC6

12) chain B
residue 1007
type
sequence D
description BINDING SITE FOR RESIDUE CA B 1415
source : AC7

13) chain B
residue 1105
type
sequence D
description BINDING SITE FOR RESIDUE CA B 1415
source : AC7

14) chain B
residue 1106
type
sequence E
description BINDING SITE FOR RESIDUE CA B 1415
source : AC7

15) chain B
residue 1007
type
sequence D
description BINDING SITE FOR RESIDUE CA B 1416
source : AC8

16) chain B
residue 1008
type
sequence F
description BINDING SITE FOR RESIDUE CA B 1416
source : AC8

17) chain B
residue 1105
type
sequence D
description BINDING SITE FOR RESIDUE CA B 1416
source : AC8

18) chain B
residue 1181
type
sequence A
description BINDING SITE FOR RESIDUE CA B 1417
source : AC9

19) chain B
residue 1183
type
sequence V
description BINDING SITE FOR RESIDUE CA B 1417
source : AC9

20) chain B
residue 1186
type
sequence I
description BINDING SITE FOR RESIDUE CA B 1417
source : AC9

21) chain B
residue 1007
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

22) chain B
residue 1105
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

23) chain B
residue 1106
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1

24) chain B
residue 1012
type SITE
sequence Y
description Substrate discrimination
source Swiss-Prot : SWS_FT_FI3


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