eF-site ID 3k6l-B PDB Code 3k6l Chain B click to enlarge Title The structure of E.coli peptide deformylase (PDF) in complex with peptidomimetic ligand BB2827 Classification HYDROLASE Compound Peptide deformylase Source Escherichia coli (strain K12) (DEF_ECOLI) Sequence B:  SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYA EEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEK SGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFEL EADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK LDRL Description Functional site 1) chain B residue 50 type sequence Q description BINDING SITE FOR RESIDUE NI B 169 source : AC3 2) chain B residue 90 type sequence C description BINDING SITE FOR RESIDUE NI B 169 source : AC3 3) chain B residue 132 type sequence H description BINDING SITE FOR RESIDUE NI B 169 source : AC3 4) chain B residue 136 type sequence H description BINDING SITE FOR RESIDUE NI B 169 source : AC3 5) chain B residue 42 type sequence E description BINDING SITE FOR RESIDUE 2BB B 170 source : AC4 6) chain B residue 43 type sequence G description BINDING SITE FOR RESIDUE 2BB B 170 source : AC4 7) chain B residue 44 type sequence I description BINDING SITE FOR RESIDUE 2BB B 170 source : AC4 8) chain B residue 45 type sequence G description BINDING SITE FOR RESIDUE 2BB B 170 source : AC4 9) chain B residue 50 type sequence Q description BINDING SITE FOR RESIDUE 2BB B 170 source : AC4 10) chain B residue 86 type sequence I description BINDING SITE FOR RESIDUE 2BB B 170 source : AC4 11) chain B residue 88 type sequence E description BINDING SITE FOR RESIDUE 2BB B 170 source : AC4 12) chain B residue 89 type sequence G description BINDING SITE FOR RESIDUE 2BB B 170 source : AC4 13) chain B residue 90 type sequence C description BINDING SITE FOR RESIDUE 2BB B 170 source : AC4 14) chain B residue 91 type sequence L description BINDING SITE FOR RESIDUE 2BB B 170 source : AC4 15) chain B residue 129 type sequence C description BINDING SITE FOR RESIDUE 2BB B 170 source : AC4 16) chain B residue 132 type sequence H description BINDING SITE FOR RESIDUE 2BB B 170 source : AC4 17) chain B residue 133 type sequence E description BINDING SITE FOR RESIDUE 2BB B 170 source : AC4 18) chain B residue 136 type sequence H description BINDING SITE FOR RESIDUE 2BB B 170 source : AC4 19) chain B residue 45 type catalytic sequence G description 98 source MCSA : MCSA2 20) chain B residue 50 type catalytic sequence Q description 98 source MCSA : MCSA2 21) chain B residue 90 type catalytic sequence C description 98 source MCSA : MCSA2 22) chain B residue 91 type catalytic sequence L description 98 source MCSA : MCSA2 23) chain B residue 132 type catalytic sequence H description 98 source MCSA : MCSA2 24) chain B residue 133 type catalytic sequence E description 98 source MCSA : MCSA2 25) chain B residue 136 type catalytic sequence H description 98 source MCSA : MCSA2 26) chain B residue 133 type ACT_SITE sequence E description ACT_SITE => ECO:0000269|PubMed:9846875 source Swiss-Prot : SWS_FT_FI1 27) chain B residue 90 type BINDING sequence C description BINDING => ECO:0000269|PubMed:9846875 source Swiss-Prot : SWS_FT_FI2 28) chain B residue 132 type BINDING sequence H description BINDING => ECO:0000269|PubMed:9846875 source Swiss-Prot : SWS_FT_FI2 29) chain B residue 136 type BINDING sequence H description BINDING => ECO:0000269|PubMed:9846875 source Swiss-Prot : SWS_FT_FI2

Display surface Download Links