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eF-site ID
|
3jra-ABCD |
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PDB Code
|
3jra |
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Chain
|
A, B, C, D |
|
click to enlarge
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Title
|
Crystal structure of Fis bound to 27bp non consensus sequence DNA F6 |
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Classification
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DNA BINDING PROTEIN/DNA |
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Compound
|
DNA-binding protein fis |
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Source
|
null (3JRA) |
|
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Sequence
|
A: |
SDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDV
NDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGT
LRKKLKKYGMN
|
| B: |
MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFA
QLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALM
MGINRGTLRKKLKKYGMN
|
| C: |
AAATTTGGTCATTTCTTAACTAAATTT
|
| D: |
AAATTTAGTTAAGAAATGACCAAATTT
|
|
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Description
|
|
Functional site
|
|
|
1)
|
chain |
A |
| residue |
74-93 |
| type |
DNA_BIND |
| sequence |
QTRAALMMGINRGTLRKKLK
|
| description |
H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00166
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
2)
|
chain |
B |
| residue |
74-93 |
| type |
DNA_BIND |
| sequence |
QTRAALMMGINRGTLRKKLK
|
| description |
H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00166
|
| source |
Swiss-Prot : SWS_FT_FI1
|
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