|
eF-site ID
|
3jcs-j |
PDB Code
|
3jcs |
Chain
|
j |
|
click to enlarge
|
|
Title
|
2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania |
Classification
|
RIBOSOME |
Compound
|
26S alpha ribosomal RNA |
Source
|
ORGANISM_SCIENTIFIC: Leishmania donovani; |
|
Sequence
|
j: |
TKGTTSMGQRHGRTHILCRRCGRNSYHVQWERCAACAYPR
ASRRRYNWSVKAIKRRRTGTGRCRYLKVVNRRIANHFK
|
|
Description
|
(1) |
PROTEIN/RNA Complex
|
|
Functional site
|
|
1)
|
chain |
j |
residue |
40 |
type |
|
sequence |
P
|
description |
BINDING SITE FOR RESIDUE MG j 101
|
source |
: BC1
|
|
2)
|
chain |
j |
residue |
43 |
type |
|
sequence |
S
|
description |
BINDING SITE FOR RESIDUE MG j 102
|
source |
: BC2
|
|
3)
|
chain |
j |
residue |
44 |
type |
|
sequence |
R
|
description |
BINDING SITE FOR RESIDUE MG j 102
|
source |
: BC2
|
|
4)
|
chain |
j |
residue |
30 |
type |
|
sequence |
Q
|
description |
BINDING SITE FOR RESIDUE MG j 103
|
source |
: BC3
|
|
5)
|
chain |
j |
residue |
32 |
type |
|
sequence |
E
|
description |
BINDING SITE FOR RESIDUE MG j 103
|
source |
: BC3
|
|
6)
|
chain |
j |
residue |
4-23 |
type |
prosite |
sequence |
GTTSMGQRHGRTHILCRRCG
|
description |
RIBOSOMAL_L37E Ribosomal protein L37e signature. GTtSmGqRhgrt.HilCrRCG
|
source |
prosite : PS01077
|
|
7)
|
chain |
j |
residue |
19-37 |
type |
ZN_FING |
sequence |
CRRCGRNSYHVQWERCAAC
|
description |
C4-type => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
8)
|
chain |
j |
residue |
19 |
type |
BINDING |
sequence |
C
|
description |
BINDING => ECO:0000250
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
9)
|
chain |
j |
residue |
22 |
type |
BINDING |
sequence |
C
|
description |
BINDING => ECO:0000250
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
10)
|
chain |
j |
residue |
34 |
type |
BINDING |
sequence |
C
|
description |
BINDING => ECO:0000250
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
11)
|
chain |
j |
residue |
37 |
type |
BINDING |
sequence |
C
|
description |
BINDING => ECO:0000250
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
|
|