eF-site ID 3jcs-j
PDB Code 3jcs
Chain j

click to enlarge
Title 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
Classification RIBOSOME
Compound 26S alpha ribosomal RNA
Source ORGANISM_SCIENTIFIC: Leishmania donovani;
Sequence j:  TKGTTSMGQRHGRTHILCRRCGRNSYHVQWERCAACAYPR
ASRRRYNWSVKAIKRRRTGTGRCRYLKVVNRRIANHFK
Description (1)  PROTEIN/RNA Complex


Functional site

1) chain j
residue 40
type
sequence P
description BINDING SITE FOR RESIDUE MG j 101
source : BC1

2) chain j
residue 43
type
sequence S
description BINDING SITE FOR RESIDUE MG j 102
source : BC2

3) chain j
residue 44
type
sequence R
description BINDING SITE FOR RESIDUE MG j 102
source : BC2

4) chain j
residue 30
type
sequence Q
description BINDING SITE FOR RESIDUE MG j 103
source : BC3

5) chain j
residue 32
type
sequence E
description BINDING SITE FOR RESIDUE MG j 103
source : BC3

6) chain j
residue 4-23
type prosite
sequence GTTSMGQRHGRTHILCRRCG
description RIBOSOMAL_L37E Ribosomal protein L37e signature. GTtSmGqRhgrt.HilCrRCG
source prosite : PS01077

7) chain j
residue 19-37
type ZN_FING
sequence CRRCGRNSYHVQWERCAAC
description C4-type => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

8) chain j
residue 19
type BINDING
sequence C
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

9) chain j
residue 22
type BINDING
sequence C
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

10) chain j
residue 34
type BINDING
sequence C
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

11) chain j
residue 37
type BINDING
sequence C
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2


Display surface

Download
Links