eF-site ID 3jcs-B
PDB Code 3jcs
Chain B

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Title 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
Classification RIBOSOME
Compound 26S alpha ribosomal RNA
Source ORGANISM_SCIENTIFIC: Leishmania donovani;
Sequence B:  KFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLT
SFMVFKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPM
VIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYKNWKQ
SAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIA
HTQLRKLRNHRVGVKKAHVQEIQINGGNVAAKIALAKSLL
EKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGVACLP
RKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLN
KKIYQIGRSVAVEPNQATTTYDLTAKTITPMGGFVGYGTV
RNDYVMLKGSVSGPRRRVMTLRRPMAPQTSRHLKEKIVLK
FIDTSSKIGHGRFQTKKEKNQWFGPLKKDRIRREER
Description (1)  PROTEIN/RNA Complex


Functional site

1) chain B
residue 246
type
sequence K
description BINDING SITE FOR RESIDUE MG 2 1603
source : GC6

2) chain B
residue 120
type
sequence K
description BINDING SITE FOR RESIDUE MG 5 203
source : JC7

3) chain B
residue 214-237
type prosite
sequence FQQSEACDVCSVTKGHGTEGVVKR
description RIBOSOMAL_L3 Ribosomal protein L3 signature. FqqseacDvcSvTkGHGteGvvkR
source prosite : PS00474


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