|
eF-site ID
|
3jb9-L |
PDB Code
|
3jb9 |
Chain
|
L |
|
click to enlarge
|
|
Title
|
Cryo-EM structure of the yeast spliceosome at 3.6 angstrom resolution |
Classification
|
RNA BINDING PROTEIN/RNA |
Compound
|
Pre-mRNA-splicing factor spp42 |
Source
|
ORGANISM_COMMON: Fission yeast; ORGANISM_SCIENTIFIC: Schizosaccharomyces pombe 972h-; |
|
Sequence
|
L: |
PNLQMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVFD
VKNYGVLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDA
VSGQKIRKHKGHAGVVNALDVLKVSELLTSVSDDCTMKVW
DSRSKDCIKTIEEKYPLTAVAIAQQGTQVFIGGIDGAIKI
WDLRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTV
RIFDVKAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAG
SSDKNVYVWSATGDLRYVLPGHEGSVNHVDFHPHQDIILS
CSSDRTIFLGELN
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
L |
residue |
192-206 |
type |
prosite |
sequence |
VFIGGIDGAIKIWDL
|
description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVTAgrDaVARVWDM
|
source |
prosite : PS00678
|
|
2)
|
chain |
L |
residue |
151-165 |
type |
prosite |
sequence |
LTSVSDDCTMKVWDS
|
description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVTAgrDaVARVWDM
|
source |
prosite : PS00678
|
|
|
|