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eF-site ID
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3jb9-K |
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PDB Code
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3jb9 |
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Chain
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K |
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click to enlarge
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Title
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Cryo-EM structure of the yeast spliceosome at 3.6 angstrom resolution |
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Classification
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RNA BINDING PROTEIN/RNA |
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Compound
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Pre-mRNA-splicing factor spp42 |
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Source
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ORGANISM_COMMON: Fission yeast; ORGANISM_SCIENTIFIC: Schizosaccharomyces pombe 972h-; |
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Sequence
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K: |
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXWHAPWTLMRVISGHLGWVRCVDVEPGNQW
FCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRH
PYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHP
TLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAV
QEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRAL
SLHPDEFTFASGSSDNIKHWKFPEGAFMGNFEGHNAIVNT
LSINSDNVMFSGADNGSMCFWDWKSGHKYQELQSVVQPGS
LDSEAGIFASSFDKTGLRLITCEADKSVKIYKQVDNATPE
THPNLPWTPSNLR
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Description
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Functional site
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1)
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chain |
K |
| residue |
304-318 |
| type |
prosite |
| sequence |
VVTGSMDSTIRLWDL
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| description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVTAgrDaVARVWDM
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| source |
prosite : PS00678
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2)
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chain |
K |
| residue |
262-276 |
| type |
prosite |
| sequence |
LVTAGRDAVARVWDM
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| description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVTAgrDaVARVWDM
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| source |
prosite : PS00678
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