eF-site ID 3jat-B
PDB Code 3jat
Chain B

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Title Cryo-EM structure of GMPCPP-microtubule (14 protofilaments) decorated with kinesin
Classification STRUCTURAL PROTEIN
Compound Tubulin alpha-1B chain
Source ORGANISM_COMMON: pig; ORGANISM_SCIENTIFIC: Sus scrofa;
Sequence B:  MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDS
DLQLERINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSGP
FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP
DRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETY
CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQ
YRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGR
MSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG
EGMDEMEFTEAESNMNDLVSEYQQYQ
Description


Functional site

1) chain B
residue 10
type
sequence G
description BINDING SITE FOR RESIDUE G2P B 501
source : CC1

2) chain B
residue 11
type
sequence Q
description BINDING SITE FOR RESIDUE G2P B 501
source : CC1

3) chain B
residue 12
type
sequence C
description BINDING SITE FOR RESIDUE G2P B 501
source : CC1

4) chain B
residue 15
type
sequence Q
description BINDING SITE FOR RESIDUE G2P B 501
source : CC1

5) chain B
residue 99
type
sequence A
description BINDING SITE FOR RESIDUE G2P B 501
source : CC1

6) chain B
residue 101
type
sequence N
description BINDING SITE FOR RESIDUE G2P B 501
source : CC1

7) chain B
residue 144
type
sequence G
description BINDING SITE FOR RESIDUE G2P B 501
source : CC1

8) chain B
residue 145
type
sequence T
description BINDING SITE FOR RESIDUE G2P B 501
source : CC1

9) chain B
residue 146
type
sequence G
description BINDING SITE FOR RESIDUE G2P B 501
source : CC1

10) chain B
residue 179
type
sequence D
description BINDING SITE FOR RESIDUE G2P B 501
source : CC1

11) chain B
residue 183
type
sequence E
description BINDING SITE FOR RESIDUE G2P B 501
source : CC1

12) chain B
residue 206
type
sequence N
description BINDING SITE FOR RESIDUE G2P B 501
source : CC1

13) chain B
residue 224
type
sequence Y
description BINDING SITE FOR RESIDUE G2P B 501
source : CC1

14) chain B
residue 228
type
sequence N
description BINDING SITE FOR RESIDUE G2P B 501
source : CC1

15) chain B
residue 254
type
sequence K
description BINDING SITE FOR RESIDUE GTP K 501
source : CC3

16) chain B
residue 11
type BINDING
sequence Q
description BINDING => ECO:0000250|UniProtKB:Q13509
source Swiss-Prot : SWS_FT_FI1

17) chain B
residue 140
type BINDING
sequence S
description BINDING => ECO:0000250|UniProtKB:Q13509
source Swiss-Prot : SWS_FT_FI1

18) chain B
residue 144
type BINDING
sequence G
description BINDING => ECO:0000250|UniProtKB:Q13509
source Swiss-Prot : SWS_FT_FI1

19) chain B
residue 145
type BINDING
sequence T
description BINDING => ECO:0000250|UniProtKB:Q13509
source Swiss-Prot : SWS_FT_FI1

20) chain B
residue 146
type BINDING
sequence G
description BINDING => ECO:0000250|UniProtKB:Q13509
source Swiss-Prot : SWS_FT_FI1

21) chain B
residue 206
type BINDING
sequence N
description BINDING => ECO:0000250|UniProtKB:Q13509
source Swiss-Prot : SWS_FT_FI1

22) chain B
residue 228
type BINDING
sequence N
description BINDING => ECO:0000250|UniProtKB:Q13509
source Swiss-Prot : SWS_FT_FI1

23) chain B
residue 326
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI10

24) chain B
residue 71
type BINDING
sequence E
description BINDING => ECO:0000250|UniProtKB:P68363
source Swiss-Prot : SWS_FT_FI2

25) chain B
residue 40
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P99024
source Swiss-Prot : SWS_FT_FI3

26) chain B
residue 60
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P99024
source Swiss-Prot : SWS_FT_FI4

27) chain B
residue 174
type MOD_RES
sequence S
description Phosphoserine; by CDK1 => ECO:0000250|UniProtKB:Q13885
source Swiss-Prot : SWS_FT_FI5

28) chain B
residue 292
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI6

29) chain B
residue 287
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI6

30) chain B
residue 320
type MOD_RES
sequence R
description Omega-N-methylarginine => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI7

31) chain B
residue 60
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI9


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