eF-site ID 3jap-k
PDB Code 3jap
Chain k

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Title Structure of a partial yeast 48S preinitiation complex in closed conformation
Classification TRANSLATION
Compound Met-tRNAi (U31:A39 variant)
Source ORGANISM_SCIENTIFIC: Kluyveromyces lactis;
Sequence k:  QATINIGTIGHVAHGKSTVVRAISGVQTVRFKDELERNIT
IKLGYANAKIYKCQEEISPKCQRPGCPGRYKLVRHVSFVD
CPGHDILMSTMLSGAAVMDAALLLIAGNESCPQPQTSEHL
AAIEIMKLKHVIILQNKVDLMREESALEHQKSILKFIRGT
IADGAPIVPISAQLKYNIDAVNEFIVKTIPVPPRDFMISP
RLIVIRSFDVNKPGAEIEDLKGGVAGGSILNGVFKLGDEI
EIRPGIVTIQCKPIFSNIVSLFAEQNDLKFAVPGGLIGVG
TKVDPTLCRADRLVGQVVGAKGHLPNIYTDIEINYFLLRR
LLGVKKQAKVRKLEPNEVLMVNIGSTATGARVVAVKADMA
RLQLTSPACTEINEKIALSRRIEKHWRLIGWATIKK
Description


Functional site

1) chain k
residue 321
type
sequence F
description BINDING SITE FOR RESIDUE MET k 601
source : HC5

2) chain k
residue 381
type
sequence F
description BINDING SITE FOR RESIDUE MET k 601
source : HC5

3) chain k
residue 382
type
sequence A
description BINDING SITE FOR RESIDUE MET k 601
source : HC5

4) chain k
residue 383
type
sequence E
description BINDING SITE FOR RESIDUE MET k 601
source : HC5

5) chain k
residue 395
type
sequence L
description BINDING SITE FOR RESIDUE MET k 601
source : HC5

6) chain k
residue 397
type
sequence G
description BINDING SITE FOR RESIDUE MET k 601
source : HC5

7) chain k
residue 114
type
sequence S
description BINDING SITE FOR RESIDUE MG k 602
source : HC6

8) chain k
residue 137
type
sequence T
description BINDING SITE FOR RESIDUE MG k 602
source : HC6

9) chain k
residue 108
type
sequence H
description BINDING SITE FOR RESIDUE GCP k 603
source : HC7

10) chain k
residue 111
type
sequence H
description BINDING SITE FOR RESIDUE GCP k 603
source : HC7

11) chain k
residue 112
type
sequence G
description BINDING SITE FOR RESIDUE GCP k 603
source : HC7

12) chain k
residue 113
type
sequence K
description BINDING SITE FOR RESIDUE GCP k 603
source : HC7

13) chain k
residue 114
type
sequence S
description BINDING SITE FOR RESIDUE GCP k 603
source : HC7

14) chain k
residue 115
type
sequence T
description BINDING SITE FOR RESIDUE GCP k 603
source : HC7

15) chain k
residue 136
type
sequence I
description BINDING SITE FOR RESIDUE GCP k 603
source : HC7

16) chain k
residue 137
type
sequence T
description BINDING SITE FOR RESIDUE GCP k 603
source : HC7

17) chain k
residue 194
type
sequence C
description BINDING SITE FOR RESIDUE GCP k 603
source : HC7

18) chain k
residue 196
type
sequence G
description BINDING SITE FOR RESIDUE GCP k 603
source : HC7

19) chain k
residue 249
type
sequence N
description BINDING SITE FOR RESIDUE GCP k 603
source : HC7

20) chain k
residue 252
type
sequence D
description BINDING SITE FOR RESIDUE GCP k 603
source : HC7

21) chain k
residue 285
type
sequence A
description BINDING SITE FOR RESIDUE GCP k 603
source : HC7

22) chain k
residue 286
type
sequence Q
description BINDING SITE FOR RESIDUE GCP k 603
source : HC7

23) chain k
residue 249
type MOD_RES
sequence N
description Phosphoserine => ECO:0007744|PubMed:18407956
source Swiss-Prot : SWS_FT_FI1

24) chain k
residue 284
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:18407956
source Swiss-Prot : SWS_FT_FI1


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