eF-site ID 3jap-123 PDB Code 3jap Chain 1, 2, 3 click to enlarge Title Structure of a partial yeast 48S preinitiation complex in closed conformation Classification TRANSLATION Compound Met-tRNAi (U31:A39 variant) Source ORGANISM_SCIENTIFIC: Kluyveromyces lactis; Sequence 1:  AGCGCCGUGGCGCAGUGGAAGCGCGCAGGUCUCAUAAACC UGAUGUCCUCGGAUCGAAACCGAGCGGCGCUACCA 2:  UAUCUGGUUGAUCCUGCCAGUAGUCAUAUGCUUGUCUCAA AGAUUAAGCCAUGCAUGUCUAAGUAUAAGCAAUUUAUACA GUGAAACUGCGAAUGGCUCAUUAAAUCAGUUAUCGUUUAU UUGAUAGUUCCUUUACUACAUGGAUAUCUGUGGUAAUUCU AGAGCUAAUACAUGCUUAAAAUCUCGACCCUUUGGAAGAG AUGUAUUUAUUAGAUAAAAAAUCAAUGUCUUCGGACUCCU UGAUGAUUCAUAAUAACUUUUCGAAUCGCAUGGCCUUGUG CUGGCGAUGGUUCAUUCAAAUUUCUGCCCUAUCAACUUUC GAUGGUAGGAUAGUGGCCUACCAUGGUUUCAACGGGUAAC GGGGAAUAAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAA CGGCUACCACAUCCAAGGAAGGCAGCAGGCGCGCAAAUUA CCCAAUCCUAAUUCAGGGAGGUAGUGACAAUAAAUAACGA UACAGGGCCCAUUCGGGUCUUGUAAUUGGAAUGAGUACAA UGUAAAUACCUUAACGAGGAACAACUGGAGGGCAAGUCUG GUGCCAGCAGCCGCGGUAAUUCCAGCUCCAGUAGCGUAUA UUAAAGUUGUUGCAGUUAAAAAGCUCGUAGUUGAACUUUG GGUCUGGUUGUCCGGUCGGUUUUUCAACCGGAUCUUUCCU UCUGGCUAACCUGUACUCCUUGUGGGUGCAGGCGAACCAG GACUUUUACUUUGAAAAAAUUAGAGUGUUCAAAGCAGGCG AAAGCUCGAAUAUAUUAGCAUGGAAUAAUGGAAUAGGACG UUUGGUUCUAUUUUGUUGGUUUCUAGGACCAUCGUAAUGA UUAAUAGGGACGGUCGGGGGCAUCAGUAUUCAAUUGUCAG AGGUGAAAUUCUUGGAUUUAUUGAAGACUAACUACUGCGA AAGCAUUUGCCAAGGACGUUUUCAUUAAUCAAGAACGAAA GUUAGGGGAUCGAAGAUGAUCAGAUACCGUCGUAGUCUUA ACCAUAAACUAUGCCGACUAGGGAUCGGGUGGUGUUUUUC UUAUGACCCACUCGGCACCUUACGAGAAAUCAAAGUCUUU GGGUUCUGGGGGGAGUAUGGUCGCAAGGCUGAAACUUAAA GGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCUGCGG CUUAAUUUGACUCAACACGGGGAAACUCACCAGGUCCAGA CACAAUAAGGAUUGACAGAUUGAGAGCUCUUUCUUGAUUU UGUGGGUGGUGGUGCAUGGCCGUUCUUAGUUGGUGGAGUG AUUUGUCUGCUUAAUUGCGAUAACGAACGAGACCUUAACC UACUAAAUAGGGUUGCUGGCACUUGCCGGUUGACUCUUCU UAGAGGGACUAUCGGUUUCAAGCCGAUGGAAGUUUGAGGC AAUAACAGGUCUGUGAUGCCCUUAGACGUUCUGGGCCGCA CGCGCGCUACACUGACGGAGCCAGCGAGUACAACCUUGGC CGAGAGGUCUGGGUAAUCUUGUGAAACUCCGUCGUGCUGG GGAUAGAGCAUUGUAAUUAUUGCUCUUCAACGAGGAAUUC CUAGUAAGCGCAAGUCAUCAGCUUGCGUUGAUUACGUCCC UGCCCUUUGUACACACCGCCCGUCGCUAGUACCGAUUGAA UGGCUUAGUGAGGCCUCAGGAUUUGCUUAGAGAAGGGGGC AACUCCAUCUCAGAGCGAAGAAUCUGGUCAAACUUGGUCA UUUAGAGGAACUAAAAGUCGUAACAAGGUUUCCGUAGGUG AACCUGCGGAAGGAUCAUUA 3:  AUCUCUCUCUAUGC Description Functional site 1) chain 2 residue 361 type sequence G description BINDING SITE FOR RESIDUE MG 2 1801 source : AC1 2) chain 2 residue 401 type sequence C description BINDING SITE FOR RESIDUE MG 2 1802 source : AC2 3) chain 2 residue 402 type sequence G description BINDING SITE FOR RESIDUE MG 2 1802 source : AC2 4) chain 2 residue 554 type sequence A description BINDING SITE FOR RESIDUE MG 2 1803 source : AC3 5) chain 2 residue 555 type sequence A description BINDING SITE FOR RESIDUE MG 2 1803 source : AC3 6) chain 2 residue 44 type sequence U description BINDING SITE FOR RESIDUE MG 2 1804 source : AC4 7) chain 2 residue 45 type sequence U description BINDING SITE FOR RESIDUE MG 2 1804 source : AC4 8) chain 2 residue 100 type sequence A description BINDING SITE FOR RESIDUE MG 2 1804 source : AC4 9) chain 2 residue 623 type sequence G description BINDING SITE FOR RESIDUE MG 2 1805 source : AC5 10) chain 2 residue 1024 type sequence A description BINDING SITE FOR RESIDUE MG 2 1805 source : AC5 11) chain 2 residue 556 type sequence G description BINDING SITE FOR RESIDUE MG 2 1806 source : AC6 12) chain 2 residue 582 type sequence C description BINDING SITE FOR RESIDUE MG 2 1806 source : AC6 13) chain 2 residue 49 type sequence C description BINDING SITE FOR RESIDUE MG 2 1807 source : AC7 14) chain 2 residue 387 type sequence G description BINDING SITE FOR RESIDUE MG 2 1807 source : AC7 15) chain 2 residue 1003 type sequence U description BINDING SITE FOR RESIDUE MG 2 1808 source : AC8 16) chain 2 residue 1004 type sequence A description BINDING SITE FOR RESIDUE MG 2 1808 source : AC8 17) chain 2 residue 1329 type sequence G description BINDING SITE FOR RESIDUE MG 2 1809 source : AC9 18) chain 2 residue 1418 type sequence C description BINDING SITE FOR RESIDUE MG 2 1809 source : AC9 19) chain 2 residue 928 type sequence A description BINDING SITE FOR RESIDUE MG 2 1811 source : BC1 20) chain 2 residue 1761 type sequence A description BINDING SITE FOR RESIDUE MG 2 1812 source : BC2 21) chain 2 residue 1766 type sequence G description BINDING SITE FOR RESIDUE MG 2 1812 source : BC2 22) chain 2 residue 1769 type sequence U description BINDING SITE FOR RESIDUE MG 2 1812 source : BC2 23) chain 2 residue 399 type sequence A description BINDING SITE FOR RESIDUE MG 2 1814 source : BC3 24) chain 2 residue 400 type sequence A description BINDING SITE FOR RESIDUE MG 2 1814 source : BC3 25) chain 2 residue 16 type sequence G description BINDING SITE FOR RESIDUE MG 2 1815 source : BC4 26) chain 2 residue 607 type sequence U description BINDING SITE FOR RESIDUE MG 2 1815 source : BC4 27) chain 2 residue 376 type sequence G description BINDING SITE FOR RESIDUE MG 2 1816 source : BC5 28) chain 2 residue 377 type sequence A description BINDING SITE FOR RESIDUE MG 2 1816 source : BC5 29) chain 2 residue 378 type sequence U description BINDING SITE FOR RESIDUE MG 2 1816 source : BC5 30) chain 2 residue 27 type sequence U description BINDING SITE FOR RESIDUE MG 2 1817 source : BC6 31) chain 2 residue 28 type sequence A description BINDING SITE FOR RESIDUE MG 2 1817 source : BC6 32) chain 2 residue 603 type sequence A description BINDING SITE FOR RESIDUE MG 2 1818 source : BC7 33) chain 2 residue 604 type sequence A description BINDING SITE FOR RESIDUE MG 2 1818 source : BC7 34) chain 2 residue 606 type sequence G description BINDING SITE FOR RESIDUE MG 2 1818 source : BC7 35) chain 2 residue 996 type sequence G description BINDING SITE FOR RESIDUE MG 2 1819 source : BC8 36) chain 2 residue 997 type sequence A description BINDING SITE FOR RESIDUE MG 2 1819 source : BC8 37) chain 2 residue 1003 type sequence U description BINDING SITE FOR RESIDUE MG 2 1819 source : BC8 38) chain 2 residue 44 type sequence U description BINDING SITE FOR RESIDUE MG 2 1821 source : BC9 39) chain 2 residue 47 type sequence A description BINDING SITE FOR RESIDUE MG 2 1821 source : BC9 40) chain 2 residue 1760 type sequence A description BINDING SITE FOR RESIDUE MG 2 1822 source : CC1 41) chain 2 residue 1761 type sequence A description BINDING SITE FOR RESIDUE MG 2 1822 source : CC1 42) chain 2 residue 1765 type sequence G description BINDING SITE FOR RESIDUE MG 2 1822 source : CC1 43) chain 2 residue 1766 type sequence G description BINDING SITE FOR RESIDUE MG 2 1822 source : CC1 44) chain 2 residue 618 type sequence A description BINDING SITE FOR RESIDUE MG 2 1823 source : CC2 45) chain 2 residue 619 type sequence A description BINDING SITE FOR RESIDUE MG 2 1823 source : CC2 46) chain 2 residue 620 type sequence A description BINDING SITE FOR RESIDUE MG 2 1823 source : CC2 47) chain 2 residue 560 type sequence G description BINDING SITE FOR RESIDUE MG 2 1824 source : CC3 48) chain 2 residue 561 type sequence G description BINDING SITE FOR RESIDUE MG 2 1824 source : CC3 49) chain 2 residue 618 type sequence A description BINDING SITE FOR RESIDUE MG 2 1825 source : CC4 50) chain 2 residue 1790 type sequence G description BINDING SITE FOR RESIDUE MG 2 1825 source : CC4 51) chain 2 residue 1327 type sequence G description BINDING SITE FOR RESIDUE MG 2 1826 source : CC5 52) chain 2 residue 1328 type sequence A description BINDING SITE FOR RESIDUE MG 2 1826 source : CC5 53) chain 2 residue 1329 type sequence G description BINDING SITE FOR RESIDUE MG 2 1826 source : CC5 54) chain 2 residue 1025 type sequence A description BINDING SITE FOR RESIDUE MG 2 1827 source : CC6 55) chain 2 residue 99 type sequence C description BINDING SITE FOR RESIDUE MG 2 1828 source : CC7 56) chain 2 residue 100 type sequence A description BINDING SITE FOR RESIDUE MG 2 1828 source : CC7 57) chain 2 residue 359 type sequence A description BINDING SITE FOR RESIDUE MG 2 1828 source : CC7 58) chain 2 residue 360 type sequence C description BINDING SITE FOR RESIDUE MG 2 1828 source : CC7 59) chain 2 residue 20 type sequence G description BINDING SITE FOR RESIDUE MG 2 1829 source : CC8 60) chain 2 residue 1768 type sequence U description BINDING SITE FOR RESIDUE MG 2 1831 source : CC9 61) chain 2 residue 94 type sequence U description BINDING SITE FOR RESIDUE MG 2 1832 source : DC1 62) chain 2 residue 95 type sequence G description BINDING SITE FOR RESIDUE MG 2 1832 source : DC1 63) chain 2 residue 1725 type sequence G description BINDING SITE FOR RESIDUE MG 2 1833 source : DC2 64) chain 2 residue 1726 type sequence U description BINDING SITE FOR RESIDUE MG 2 1833 source : DC2 65) chain 2 residue 1628 type sequence U description BINDING SITE FOR RESIDUE MG 2 1834 source : DC3 66) chain 2 residue 1790 type sequence G description BINDING SITE FOR RESIDUE MG 2 1834 source : DC3 67) chain 2 residue 1791 type sequence G description BINDING SITE FOR RESIDUE MG 2 1834 source : DC3 68) chain 2 residue 63 type sequence G description BINDING SITE FOR RESIDUE MG 2 1835 source : DC4 69) chain 2 residue 64 type sequence U description BINDING SITE FOR RESIDUE MG 2 1835 source : DC4 70) chain 2 residue 459 type sequence A description BINDING SITE FOR RESIDUE MG 2 1837 source : DC5 71) chain 2 residue 460 type sequence G description BINDING SITE FOR RESIDUE MG 2 1837 source : DC5 72) chain 2 residue 465 type sequence U description BINDING SITE FOR RESIDUE MG 2 1838 source : DC6 73) chain 2 residue 466 type sequence G description BINDING SITE FOR RESIDUE MG 2 1838 source : DC6 74) chain 2 residue 624 type sequence C description BINDING SITE FOR RESIDUE MG 2 1839 source : DC7 75) chain 2 residue 984 type sequence G description BINDING SITE FOR RESIDUE MG 2 1840 source : DC8 76) chain 2 residue 985 type sequence G description BINDING SITE FOR RESIDUE MG 2 1840 source : DC8 77) chain 2 residue 1013 type sequence G description BINDING SITE FOR RESIDUE MG 2 1840 source : DC8 78) chain 2 residue 1412 type sequence U description BINDING SITE FOR RESIDUE MG 2 1841 source : DC9 79) chain 2 residue 1416 type sequence G description BINDING SITE FOR RESIDUE MG 2 1841 source : DC9 80) chain 2 residue 548 type sequence G description BINDING SITE FOR RESIDUE MG 2 1842 source : EC1 81) chain 2 residue 104 type sequence A description BINDING SITE FOR RESIDUE MG 2 1843 source : EC2 82) chain 2 residue 403 type sequence G description BINDING SITE FOR RESIDUE MG 2 1846 source : EC3 83) chain 2 residue 1302 type sequence U description BINDING SITE FOR RESIDUE MG 2 1847 source : EC4 84) chain 2 residue 977 type sequence A description BINDING SITE FOR RESIDUE MG 2 1848 source : EC5 85) chain 2 residue 978 type sequence A description BINDING SITE FOR RESIDUE MG 2 1848 source : EC5 86) chain 2 residue 759 type sequence U description BINDING SITE FOR RESIDUE MG 2 1850 source : EC6 87) chain 2 residue 760 type sequence A description BINDING SITE FOR RESIDUE MG 2 1850 source : EC6 88) chain 2 residue 761 type sequence G description BINDING SITE FOR RESIDUE MG 2 1850 source : EC6 89) chain 2 residue 826 type sequence C description BINDING SITE FOR RESIDUE MG 2 1852 source : EC7 90) chain 2 residue 843 type sequence A description BINDING SITE FOR RESIDUE MG 2 1852 source : EC7 91) chain 2 residue 844 type sequence G description BINDING SITE FOR RESIDUE MG 2 1852 source : EC7 92) chain 2 residue 529 type sequence C description BINDING SITE FOR RESIDUE MG 2 1853 source : EC8 93) chain 2 residue 530 type sequence C description BINDING SITE FOR RESIDUE MG 2 1853 source : EC8 94) chain 2 residue 1293 type sequence G description BINDING SITE FOR RESIDUE MG 2 1854 source : EC9 95) chain 2 residue 1302 type sequence U description BINDING SITE FOR RESIDUE MG 2 1854 source : EC9 96) chain 2 residue 988 type sequence U description BINDING SITE FOR RESIDUE MG 2 1857 source : FC2 97) chain 2 residue 212 type sequence A description BINDING SITE FOR RESIDUE MG 2 1858 source : FC3 98) chain 2 residue 1539 type sequence G description BINDING SITE FOR RESIDUE MG 2 1859 source : FC4 99) chain 2 residue 1540 type sequence G description BINDING SITE FOR RESIDUE MG 2 1859 source : FC4 100) chain 2 residue 1008 type sequence U description BINDING SITE FOR RESIDUE MG 2 1863 source : FC5 101) chain 2 residue 1053 type sequence U description BINDING SITE FOR RESIDUE MG 2 1865 source : FC6 102) chain 2 residue 1054 type sequence U description BINDING SITE FOR RESIDUE MG 2 1865 source : FC6 103) chain 2 residue 1158 type sequence C description BINDING SITE FOR RESIDUE MG 2 1868 source : FC7 104) chain 2 residue 1282 type sequence U description BINDING SITE FOR RESIDUE MG 2 1868 source : FC7 105) chain 2 residue 1467 type sequence A description BINDING SITE FOR RESIDUE MG 2 1869 source : FC8 106) chain 2 residue 1443 type sequence G description BINDING SITE FOR RESIDUE MG 2 1870 source : FC9 107) chain 2 residue 1455 type sequence C description BINDING SITE FOR RESIDUE MG 2 1871 source : GC1 108) chain 2 residue 1199 type sequence G description BINDING SITE FOR RESIDUE MG 2 1872 source : GC2 109) chain 2 residue 1200 type sequence G description BINDING SITE FOR RESIDUE MG 2 1872 source : GC2 110) chain 2 residue 1429 type sequence C description BINDING SITE FOR RESIDUE MG 2 1873 source : GC3 111) chain 2 residue 1435 type sequence U description BINDING SITE FOR RESIDUE MG 2 1873 source : GC3 112) chain 2 residue 1195 type sequence A description BINDING SITE FOR RESIDUE MG 2 1874 source : GC4 113) chain 2 residue 1196 type sequence C description BINDING SITE FOR RESIDUE MG 2 1874 source : GC4 114) chain 2 residue 1267 type sequence G description BINDING SITE FOR RESIDUE MG 2 1875 source : GC5 115) chain 2 residue 1268 type sequence U description BINDING SITE FOR RESIDUE MG 2 1875 source : GC5 116) chain 2 residue 1273 type sequence C description BINDING SITE FOR RESIDUE MG 2 1876 source : GC6 117) chain 2 residue 1425 type sequence A description BINDING SITE FOR RESIDUE MG 2 1876 source : GC6 118) chain 2 residue 1426 type sequence G description BINDING SITE FOR RESIDUE MG 2 1876 source : GC6 119) chain 2 residue 1427 type sequence G description BINDING SITE FOR RESIDUE MG 2 1876 source : GC6 120) chain 2 residue 1539 type sequence G description BINDING SITE FOR RESIDUE MG 2 1877 source : GC7 121) chain 2 residue 1540 type sequence G description BINDING SITE FOR RESIDUE MG 2 1877 source : GC7 122) chain 2 residue 1566 type sequence C description BINDING SITE FOR RESIDUE MG 2 1877 source : GC7 123) chain 2 residue 1567 type sequence A description BINDING SITE FOR RESIDUE MG 2 1877 source : GC7 124) chain 2 residue 1482 type sequence G description BINDING SITE FOR RESIDUE MG 2 1878 source : GC8 125) chain 2 residue 1520 type sequence U description BINDING SITE FOR RESIDUE MG 2 1878 source : GC8 126) chain 2 residue 1273 type sequence C description BINDING SITE FOR RESIDUE MG 2 1879 source : GC9 127) chain 2 residue 1426 type sequence G description BINDING SITE FOR RESIDUE MG 2 1879 source : GC9 128) chain 2 residue 1427 type sequence G description BINDING SITE FOR RESIDUE MG 2 1879 source : GC9 129) chain 2 residue 1201 type sequence A description BINDING SITE FOR RESIDUE MG 2 1880 source : HC1 130) chain 2 residue 1202 type sequence A description BINDING SITE FOR RESIDUE MG 2 1880 source : HC1 131) chain 2 residue 1597 type sequence C description BINDING SITE FOR RESIDUE MG 2 1880 source : HC1 132) chain 1 residue 76 type sequence A description BINDING SITE FOR RESIDUE MET k 601 source : HC5

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