eF-site ID 3j81-123 PDB Code 3j81 Chain 1, 2, 3 click to enlarge Title CryoEM structure of a partial yeast 48S preinitiation complex Classification RIBOSOME Compound 18S rRNA Source ORGANISM_SCIENTIFIC: Kluyveromyces lactis; Sequence 1:  GCGCCGUGGCGCAGUGGAAGCGCGCAGGUCUCAUAAACCU GAUGUCCUCGGAUCGAAACCGAGCGGCGCUACCA 2:  UAUCUGGUUGAUCCUGCCAGUAGUCAUAUGCUUGUCUCAA AGAUUAAGCCAUGCAUGUCUAAGUAUAAGCAAUUUAUACA GUGAAACUGCGAAUGGCUCAUUAAAUCAGUUAUCGUUUAU UUGAUAGUUCCUUUACUACAUGGAUAUCUGUGGUAAUUCU AGAGCUAAUACAUGCUUAAAAUCUCGACCCUUUGGAAGAG AUGUAUUUAUUAGAUAAAAAAUCAAUGUCUUCGGACUCCU UGAUGAUUCAUAAUAACUUUUCGAAUCGCAUGGCCUUGUG CUGGCGAUGGUUCAUUCAAAUUUCUGCCCUAUCAACUUUC GAUGGUAGGAUAGUGGCCUACCAUGGUUUCAACGGGUAAC GGGGAAUAAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAA CGGCUACCACAUCCAAGGAAGGCAGCAGGCGCGCAAAUUA CCCAAUCCUAAUUCAGGGAGGUAGUGACAAUAAAUAACGA UACAGGGCCCAUUCGGGUCUUGUAAUUGGAAUGAGUACAA UGUAAAUACCUUAACGAGGAACAACUGGAGGGCAAGUCUG GUGCCAGCAGCCGCGGUAAUUCCAGCUCCAGUAGCGUAUA UUAAAGUUGUUGCAGUUAAAAAGCUCGUAGUUGAACUUUG GGUCUGGUUGUCCGGUCGGUUUUUCAACCGGAUCUUUCCU UCUGGCUAACCUGUACUCCUUGUGGGUGCAGGCGAACCAG GACUUUUACUUUGAAAAAAUUAGAGUGUUCAAAGCAGGCG AAAGCUCGAAUAUAUUAGCAUGGAAUAAUGGAAUAGGACG UUUGGUUCUAUUUUGUUGGUUUCUAGGACCAUCGUAAUGA UUAAUAGGGACGGUCGGGGGCAUCAGUAUUCAAUUGUCAG AGGUGAAAUUCUUGGAUUUAUUGAAGACUAACUACUGCGA AAGCAUUUGCCAAGGACGUUUUCAUUAAUCAAGAACGAAA GUUAGGGGAUCGAAGAUGAUCAGAUACCGUCGUAGUCUUA ACCAUAAACUAUGCCGACUAGGGAUCGGGUGGUGUUUUUC UUAUGACCCACUCGGCACCUUACGAGAAAUCAAAGUCUUU GGGUUCUGGGGGGAGUAUGGUCGCAAGGCUGAAACUUAAA GGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCUGCGG CUUAAUUUGACUCAACACGGGGAAACUCACCAGGUCCAGA CACAAUAAGGAUUGACAGAUUGAGAGCUCUUUCUUGAUUU UGUGGGUGGUGGUGCAUGGCCGUUCUUAGUUGGUGGAGUG AUUUGUCUGCUUAAUUGCGAUAACGAACGAGACCUUAACC UACUAAAUAGGGUUGCUGGCACUUGCCGGUUGACUCUUCU UAGAGGGACUAUCGGUUUCAAGCCGAUGGAAGUUUGAGGC AAUAACAGGUCUGUGAUGCCCUUAGACGUUCUGGGCCGCA CGCGCGCUACACUGACGGAGCCAGCGAGUACAACCUUGGC CGAGAGGUCUGGGUAAUCUUGUGAAACUCCGUCGUGCUGG GGAUAGAGCAUUGUAAUUAUUGCUCUUCAACGAGGAAUUC CUAGUAAGCGCAAGUCAUCAGCUUGCGUUGAUUACGUCCC UGCCCUUUGUACACACCGCCCGUCGCUAGUACCGAUUGAA UGGCUUAGUGAGGCCUCAGGAUUUGCUUAGAGAAGGGGGC AACUCCAUCUCAGAGCGAAGAAUCUGGUCAAACUUGGUCA UUUAGAGGAACUAAAAGUCGUAACAAGGUUUCCGUAGGUG AACCUGCGGAAGGAUCAUUA 3:  AUCUCUCUCUAUGCUCUCUCUC Description Functional site 1) chain 2 residue 361 type sequence G description BINDING SITE FOR RESIDUE MG 2 1801 source : AC1 2) chain 2 residue 362 type sequence G description BINDING SITE FOR RESIDUE MG 2 1801 source : AC1 3) chain 2 residue 93 type sequence A description BINDING SITE FOR RESIDUE MG 2 1802 source : AC2 4) chain 2 residue 95 type sequence G description BINDING SITE FOR RESIDUE MG 2 1802 source : AC2 5) chain 2 residue 401 type sequence C description BINDING SITE FOR RESIDUE MG 2 1802 source : AC2 6) chain 2 residue 402 type sequence G description BINDING SITE FOR RESIDUE MG 2 1802 source : AC2 7) chain 2 residue 551 type sequence G description BINDING SITE FOR RESIDUE MG 2 1803 source : AC3 8) chain 2 residue 552 type sequence G description BINDING SITE FOR RESIDUE MG 2 1803 source : AC3 9) chain 2 residue 554 type sequence A description BINDING SITE FOR RESIDUE MG 2 1803 source : AC3 10) chain 2 residue 555 type sequence A description BINDING SITE FOR RESIDUE MG 2 1803 source : AC3 11) chain 2 residue 100 type sequence A description BINDING SITE FOR RESIDUE MG 2 1804 source : AC4 12) chain 2 residue 360 type sequence C description BINDING SITE FOR RESIDUE MG 2 1804 source : AC4 13) chain 2 residue 623 type sequence G description BINDING SITE FOR RESIDUE MG 2 1805 source : AC5 14) chain 2 residue 1024 type sequence A description BINDING SITE FOR RESIDUE MG 2 1805 source : AC5 15) chain 2 residue 582 type sequence C description BINDING SITE FOR RESIDUE MG 2 1806 source : AC6 16) chain 2 residue 49 type sequence C description BINDING SITE FOR RESIDUE MG 2 1807 source : AC7 17) chain 2 residue 1329 type sequence G description BINDING SITE FOR RESIDUE MG 2 1809 source : AC8 18) chain 2 residue 1418 type sequence C description BINDING SITE FOR RESIDUE MG 2 1809 source : AC8 19) chain 2 residue 11 type sequence A description BINDING SITE FOR RESIDUE MG 2 1810 source : AC9 20) chain 2 residue 927 type sequence U description BINDING SITE FOR RESIDUE MG 2 1811 source : BC1 21) chain 2 residue 928 type sequence A description BINDING SITE FOR RESIDUE MG 2 1811 source : BC1 22) chain 2 residue 1760 type sequence A description BINDING SITE FOR RESIDUE MG 2 1812 source : BC2 23) chain 2 residue 1761 type sequence A description BINDING SITE FOR RESIDUE MG 2 1812 source : BC2 24) chain 2 residue 1766 type sequence G description BINDING SITE FOR RESIDUE MG 2 1812 source : BC2 25) chain 2 residue 1769 type sequence U description BINDING SITE FOR RESIDUE MG 2 1812 source : BC2 26) chain 2 residue 1782 type sequence C description BINDING SITE FOR RESIDUE MG 2 1812 source : BC2 27) chain 2 residue 548 type sequence G description BINDING SITE FOR RESIDUE MG 2 1813 source : BC3 28) chain 2 residue 400 type sequence A description BINDING SITE FOR RESIDUE MG 2 1814 source : BC4 29) chain 2 residue 16 type sequence G description BINDING SITE FOR RESIDUE MG 2 1815 source : BC5 30) chain 2 residue 361 type sequence G description BINDING SITE FOR RESIDUE MG 2 1816 source : BC6 31) chain 2 residue 362 type sequence G description BINDING SITE FOR RESIDUE MG 2 1816 source : BC6 32) chain 2 residue 376 type sequence G description BINDING SITE FOR RESIDUE MG 2 1816 source : BC6 33) chain 2 residue 377 type sequence A description BINDING SITE FOR RESIDUE MG 2 1816 source : BC6 34) chain 2 residue 378 type sequence U description BINDING SITE FOR RESIDUE MG 2 1816 source : BC6 35) chain 2 residue 28 type sequence A description BINDING SITE FOR RESIDUE MG 2 1817 source : BC7 36) chain 2 residue 29 type sequence U description BINDING SITE FOR RESIDUE MG 2 1817 source : BC7 37) chain 2 residue 370 type sequence G description BINDING SITE FOR RESIDUE MG 2 1818 source : BC8 38) chain 2 residue 604 type sequence A description BINDING SITE FOR RESIDUE MG 2 1818 source : BC8 39) chain 2 residue 606 type sequence G description BINDING SITE FOR RESIDUE MG 2 1818 source : BC8 40) chain 2 residue 997 type sequence A description BINDING SITE FOR RESIDUE MG 2 1819 source : BC9 41) chain 2 residue 1003 type sequence U description BINDING SITE FOR RESIDUE MG 2 1819 source : BC9 42) chain 2 residue 426 type sequence C description BINDING SITE FOR RESIDUE MG 2 1820 source : CC1 43) chain 2 residue 428 type sequence G description BINDING SITE FOR RESIDUE MG 2 1820 source : CC1 44) chain 2 residue 44 type sequence U description BINDING SITE FOR RESIDUE MG 2 1821 source : CC2 45) chain 2 residue 47 type sequence A description BINDING SITE FOR RESIDUE MG 2 1821 source : CC2 46) chain 2 residue 1759 type sequence U description BINDING SITE FOR RESIDUE MG 2 1822 source : CC3 47) chain 2 residue 1760 type sequence A description BINDING SITE FOR RESIDUE MG 2 1822 source : CC3 48) chain 2 residue 1761 type sequence A description BINDING SITE FOR RESIDUE MG 2 1822 source : CC3 49) chain 2 residue 1765 type sequence G description BINDING SITE FOR RESIDUE MG 2 1822 source : CC3 50) chain 2 residue 1766 type sequence G description BINDING SITE FOR RESIDUE MG 2 1822 source : CC3 51) chain 2 residue 618 type sequence A description BINDING SITE FOR RESIDUE MG 2 1823 source : CC4 52) chain 2 residue 619 type sequence A description BINDING SITE FOR RESIDUE MG 2 1823 source : CC4 53) chain 2 residue 620 type sequence A description BINDING SITE FOR RESIDUE MG 2 1823 source : CC4 54) chain 2 residue 618 type sequence A description BINDING SITE FOR RESIDUE MG 2 1825 source : CC5 55) chain 2 residue 1326 type sequence C description BINDING SITE FOR RESIDUE MG 2 1826 source : CC6 56) chain 2 residue 1327 type sequence G description BINDING SITE FOR RESIDUE MG 2 1826 source : CC6 57) chain 2 residue 1329 type sequence G description BINDING SITE FOR RESIDUE MG 2 1826 source : CC6 58) chain 2 residue 622 type sequence A description BINDING SITE FOR RESIDUE MG 2 1827 source : CC7 59) chain 2 residue 99 type sequence C description BINDING SITE FOR RESIDUE MG 2 1828 source : CC8 60) chain 2 residue 100 type sequence A description BINDING SITE FOR RESIDUE MG 2 1828 source : CC8 61) chain 2 residue 101 type sequence U description BINDING SITE FOR RESIDUE MG 2 1828 source : CC8 62) chain 2 residue 360 type sequence C description BINDING SITE FOR RESIDUE MG 2 1828 source : CC8 63) chain 2 residue 1108 type sequence G description BINDING SITE FOR RESIDUE MG 2 1830 source : CC9 64) chain 2 residue 1109 type sequence G description BINDING SITE FOR RESIDUE MG 2 1830 source : CC9 65) chain 2 residue 1768 type sequence U description BINDING SITE FOR RESIDUE MG 2 1831 source : DC1 66) chain 2 residue 95 type sequence G description BINDING SITE FOR RESIDUE MG 2 1832 source : DC2 67) chain 2 residue 1670 type sequence G description BINDING SITE FOR RESIDUE MG 2 1833 source : DC3 68) chain 2 residue 1671 type sequence G description BINDING SITE FOR RESIDUE MG 2 1833 source : DC3 69) chain 2 residue 1672 type sequence C description BINDING SITE FOR RESIDUE MG 2 1833 source : DC3 70) chain 2 residue 1726 type sequence U description BINDING SITE FOR RESIDUE MG 2 1833 source : DC3 71) chain 2 residue 1628 type sequence U description BINDING SITE FOR RESIDUE MG 2 1834 source : DC4 72) chain 2 residue 1791 type sequence G description BINDING SITE FOR RESIDUE MG 2 1834 source : DC4 73) chain 2 residue 458 type sequence G description BINDING SITE FOR RESIDUE MG 2 1836 source : DC5 74) chain 2 residue 459 type sequence A description BINDING SITE FOR RESIDUE MG 2 1836 source : DC5 75) chain 2 residue 460 type sequence G description BINDING SITE FOR RESIDUE MG 2 1836 source : DC5 76) chain 2 residue 466 type sequence G description BINDING SITE FOR RESIDUE MG 2 1837 source : DC6 77) chain 2 residue 467 type sequence A description BINDING SITE FOR RESIDUE MG 2 1837 source : DC6 78) chain 2 residue 622 type sequence A description BINDING SITE FOR RESIDUE MG 2 1838 source : DC7 79) chain 2 residue 624 type sequence C description BINDING SITE FOR RESIDUE MG 2 1838 source : DC7 80) chain 2 residue 1030 type sequence U description BINDING SITE FOR RESIDUE MG 2 1838 source : DC7 81) chain 2 residue 984 type sequence G description BINDING SITE FOR RESIDUE MG 2 1839 source : DC8 82) chain 2 residue 1013 type sequence G description BINDING SITE FOR RESIDUE MG 2 1839 source : DC8 83) chain 2 residue 1416 type sequence G description BINDING SITE FOR RESIDUE MG 2 1840 source : DC9 84) chain 2 residue 104 type sequence A description BINDING SITE FOR RESIDUE MG 2 1842 source : EC1 85) chain 2 residue 353 type sequence C description BINDING SITE FOR RESIDUE MG 2 1842 source : EC1 86) chain 2 residue 1064 type sequence A description BINDING SITE FOR RESIDUE MG 2 1843 source : EC2 87) chain 2 residue 403 type sequence G description BINDING SITE FOR RESIDUE MG 2 1845 source : EC3 88) chain 2 residue 404 type sequence C description BINDING SITE FOR RESIDUE MG 2 1845 source : EC3 89) chain 2 residue 422 type sequence G description BINDING SITE FOR RESIDUE MG 2 1845 source : EC3 90) chain 2 residue 1302 type sequence U description BINDING SITE FOR RESIDUE MG 2 1846 source : EC4 91) chain 2 residue 978 type sequence A description BINDING SITE FOR RESIDUE MG 2 1847 source : EC5 92) chain 2 residue 58 type sequence U description BINDING SITE FOR RESIDUE MG 2 1848 source : EC6 93) chain 2 residue 760 type sequence A description BINDING SITE FOR RESIDUE MG 2 1849 source : EC7 94) chain 2 residue 1139 type sequence G description BINDING SITE FOR RESIDUE MG 2 1850 source : EC8 95) chain 2 residue 826 type sequence C description BINDING SITE FOR RESIDUE MG 2 1851 source : EC9 96) chain 2 residue 842 type sequence U description BINDING SITE FOR RESIDUE MG 2 1851 source : EC9 97) chain 2 residue 514 type sequence A description BINDING SITE FOR RESIDUE MG 2 1852 source : FC1 98) chain 2 residue 529 type sequence C description BINDING SITE FOR RESIDUE MG 2 1852 source : FC1 99) chain 2 residue 530 type sequence C description BINDING SITE FOR RESIDUE MG 2 1852 source : FC1 100) chain 2 residue 1301 type sequence U description BINDING SITE FOR RESIDUE MG 2 1853 source : FC2 101) chain 2 residue 937 type sequence G description BINDING SITE FOR RESIDUE MG 2 1855 source : FC3 102) chain 2 residue 1010 type sequence G description BINDING SITE FOR RESIDUE MG 2 1856 source : FC4 103) chain 2 residue 212 type sequence A description BINDING SITE FOR RESIDUE MG 2 1857 source : FC5 104) chain 2 residue 213 type sequence G description BINDING SITE FOR RESIDUE MG 2 1857 source : FC5 105) chain 2 residue 1538 type sequence G description BINDING SITE FOR RESIDUE MG 2 1858 source : FC6 106) chain 2 residue 1539 type sequence G description BINDING SITE FOR RESIDUE MG 2 1858 source : FC6 107) chain 2 residue 1636 type sequence G description BINDING SITE FOR RESIDUE MG 2 1860 source : FC7 108) chain 2 residue 1008 type sequence U description BINDING SITE FOR RESIDUE MG 2 1863 source : FC8 109) chain 2 residue 884 type sequence G description BINDING SITE FOR RESIDUE MG 2 1866 source : FC9 110) chain 2 residue 924 type sequence G description BINDING SITE FOR RESIDUE MG 2 1866 source : FC9 111) chain 2 residue 1158 type sequence C description BINDING SITE FOR RESIDUE MG 2 1868 source : GC1 112) chain 2 residue 1282 type sequence U description BINDING SITE FOR RESIDUE MG 2 1868 source : GC1 113) chain 2 residue 1467 type sequence A description BINDING SITE FOR RESIDUE MG 2 1869 source : GC2 114) chain 2 residue 1473 type sequence A description BINDING SITE FOR RESIDUE MG 2 1869 source : GC2 115) chain 2 residue 1539 type sequence G description BINDING SITE FOR RESIDUE MG 2 1869 source : GC2 116) chain 2 residue 1443 type sequence G description BINDING SITE FOR RESIDUE MG 2 1870 source : GC3 117) chain 2 residue 1444 type sequence A description BINDING SITE FOR RESIDUE MG 2 1870 source : GC3 118) chain 2 residue 1175 type sequence G description BINDING SITE FOR RESIDUE MG 2 1871 source : GC4 119) chain 2 residue 1455 type sequence C description BINDING SITE FOR RESIDUE MG 2 1871 source : GC4 120) chain 2 residue 1198 type sequence G description BINDING SITE FOR RESIDUE MG 2 1872 source : GC5 121) chain 2 residue 1200 type sequence G description BINDING SITE FOR RESIDUE MG 2 1872 source : GC5 122) chain 2 residue 1429 type sequence C description BINDING SITE FOR RESIDUE MG 2 1873 source : GC6 123) chain 2 residue 1196 type sequence C description BINDING SITE FOR RESIDUE MG 2 1874 source : GC7 124) chain 2 residue 1463 type sequence C description BINDING SITE FOR RESIDUE MG 2 1874 source : GC7 125) chain 2 residue 1268 type sequence U description BINDING SITE FOR RESIDUE MG 2 1875 source : GC8 126) chain 2 residue 1272 type sequence G description BINDING SITE FOR RESIDUE MG 2 1876 source : GC9 127) chain 2 residue 1273 type sequence C description BINDING SITE FOR RESIDUE MG 2 1876 source : GC9 128) chain 2 residue 1426 type sequence G description BINDING SITE FOR RESIDUE MG 2 1876 source : GC9 129) chain 2 residue 1537 type sequence G description BINDING SITE FOR RESIDUE MG 2 1877 source : HC1 130) chain 2 residue 1539 type sequence G description BINDING SITE FOR RESIDUE MG 2 1877 source : HC1 131) chain 2 residue 1482 type sequence G description BINDING SITE FOR RESIDUE MG 2 1878 source : HC2 132) chain 2 residue 1520 type sequence U description BINDING SITE FOR RESIDUE MG 2 1878 source : HC2 133) chain 2 residue 1273 type sequence C description BINDING SITE FOR RESIDUE MG 2 1879 source : HC3 134) chain 2 residue 1426 type sequence G description BINDING SITE FOR RESIDUE MG 2 1879 source : HC3 135) chain 2 residue 1427 type sequence G description BINDING SITE FOR RESIDUE MG 2 1879 source : HC3 136) chain 2 residue 1201 type sequence A description BINDING SITE FOR RESIDUE MG 2 1880 source : HC4 137) chain 2 residue 1202 type sequence A description BINDING SITE FOR RESIDUE MG 2 1880 source : HC4 138) chain 2 residue 64 type sequence U description BINDING SITE FOR RESIDUE MG G 301 source : HC5 139) chain 2 residue 168 type sequence A description BINDING SITE FOR RESIDUE MG G 301 source : HC5 140) chain 1 residue 76 type sequence A description BINDING SITE FOR RESIDUE MET k 601 source : HC9

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