|
eF-site ID
|
3j79-a |
PDB Code
|
3j79 |
Chain
|
a |
|
click to enlarge
|
|
Title
|
Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit |
Classification
|
RIBOSOME/INHIBITOR |
Compound
|
28S ribosomal RNA |
Source
|
ORGANISM_SCIENTIFIC: Plasmodium falciparum; |
|
Sequence
|
a: |
AQRVHYRRHNHYNTKSNKVRPVRTPGGKLTIHVVKKKAGK
PKCADCKTAIQGVKALRPADNYRARRKNRTVARAYGGSIC
ARCIRERIMRAFLFEEQKCVRQVLKE
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
a |
residue |
44 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN a 200
|
source |
: RC6
|
|
2)
|
chain |
a |
residue |
47 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN a 200
|
source |
: RC6
|
|
3)
|
chain |
a |
residue |
49 |
type |
|
sequence |
T
|
description |
BINDING SITE FOR RESIDUE ZN a 200
|
source |
: RC6
|
|
4)
|
chain |
a |
residue |
81 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN a 200
|
source |
: RC6
|
|
5)
|
chain |
a |
residue |
84 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN a 200
|
source |
: RC6
|
|
6)
|
chain |
a |
residue |
15-28 |
type |
prosite |
sequence |
TKSNKVRPVRTPGG
|
description |
RIBOSOMAL_L34E Ribosomal protein L34e signature. TkSnKvrpvRTPGG
|
source |
prosite : PS01145
|
|
|
|