eF-site ID 3j79-E
PDB Code 3j79
Chain E

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Title Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit
Classification RIBOSOME/INHIBITOR
Compound 28S ribosomal RNA
Source ORGANISM_SCIENTIFIC: Plasmodium falciparum;
Sequence E:  SHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPP
HFTAFMGYKAGMTHIVREVDKPGSKLHKKEIVEACTIIEC
APMVVVGIVGYRETPKGLRILSTVWANHVSDEFRRRYYKN
WYKSEKKAFTKSLNVPEATKNCLLKRIEKYCTVLRAICHT
QPSKTPLRMKKAHIMEVQINGGSMKEKLEFVKEMLEKNLP
VSTVFNPNEMIDVISVTKGHGTKGVVSRYGVKRLPRKTHR
GLRKVACIGAWHPARVQFQIPRHGQKGYFHRTERNKKIYR
IGLKTDKNSASTDADITEKKITPMGGFPHYGVVNEDFLLL
KGCVAGTKKRPITLRKNIVPQVSRDALAQVSLKFIDTSSK
IGHGRFQTSEEKVKYYGPLK
Description


Functional site

1) chain E
residue 361
type
sequence K
description BINDING SITE FOR RESIDUE MG A 3866
source : GC9

2) chain E
residue 206-229
type prosite
sequence FNPNEMIDVISVTKGHGTKGVVSR
description RIBOSOMAL_L3 Ribosomal protein L3 signature. FnpnemiDviSvTkGHGtkGvvsR
source prosite : PS00474


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