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eF-site ID
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3j79-E |
PDB Code
|
3j79 |
Chain
|
E |
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click to enlarge
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Title
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Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit |
Classification
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RIBOSOME/INHIBITOR |
Compound
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28S ribosomal RNA |
Source
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ORGANISM_SCIENTIFIC: Plasmodium falciparum; |
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Sequence
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E: |
SHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPP
HFTAFMGYKAGMTHIVREVDKPGSKLHKKEIVEACTIIEC
APMVVVGIVGYRETPKGLRILSTVWANHVSDEFRRRYYKN
WYKSEKKAFTKSLNVPEATKNCLLKRIEKYCTVLRAICHT
QPSKTPLRMKKAHIMEVQINGGSMKEKLEFVKEMLEKNLP
VSTVFNPNEMIDVISVTKGHGTKGVVSRYGVKRLPRKTHR
GLRKVACIGAWHPARVQFQIPRHGQKGYFHRTERNKKIYR
IGLKTDKNSASTDADITEKKITPMGGFPHYGVVNEDFLLL
KGCVAGTKKRPITLRKNIVPQVSRDALAQVSLKFIDTSSK
IGHGRFQTSEEKVKYYGPLK
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Description
|
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Functional site
|
|
1)
|
chain |
E |
residue |
361 |
type |
|
sequence |
K
|
description |
BINDING SITE FOR RESIDUE MG A 3866
|
source |
: GC9
|
|
2)
|
chain |
E |
residue |
206-229 |
type |
prosite |
sequence |
FNPNEMIDVISVTKGHGTKGVVSR
|
description |
RIBOSOMAL_L3 Ribosomal protein L3 signature. FnpnemiDviSvTkGHGtkGvvsR
|
source |
prosite : PS00474
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