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eF-site ID
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3j46-45 |
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PDB Code
|
3j46 |
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Chain
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4, 5 |
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click to enlarge
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Title
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Structure of the SecY protein translocation channel in action |
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Classification
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RIBOSOME/PROTEIN TRANSPORT |
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Compound
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Protein translocase subunit SecY |
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Source
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ORGANISM_SCIENTIFIC: Escherichia coli; |
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Sequence
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4: |
CUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCU
UUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAA
AUACCACCCUUUAAUGUUUGAUGUUCUAA
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| 5: |
MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVE
SVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQ
GANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDA
MRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
VRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAK
PTQAKGVYIKKVSISTTMGAGVAVDQAGLSASVN
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Description
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(1) |
SECY, SECE, SECG, NC100, 50S ribosomal protein L1, 50S ribosomal protein L23P, 50S ribosomal protein L24P, 50S ribosomal protein L29P
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Functional site
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1)
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chain |
5 |
| residue |
121-139 |
| type |
prosite |
| sequence |
MRVVGQLGQVLGPRGLMPN
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| description |
RIBOSOMAL_L1 Ribosomal protein L1 signature. MrvVgq.LGqvLGPRGlMPN
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| source |
prosite : PS01199
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2)
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chain |
5 |
| residue |
105 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6-succinyllysine => ECO:0000269|PubMed:21151122
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| source |
Swiss-Prot : SWS_FT_FI1
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3)
|
chain |
5 |
| residue |
154 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6-succinyllysine => ECO:0000269|PubMed:21151122
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
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4)
|
chain |
5 |
| residue |
186 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6-succinyllysine => ECO:0000269|PubMed:21151122
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
5)
|
chain |
5 |
| residue |
197 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6-succinyllysine => ECO:0000269|PubMed:21151122
|
| source |
Swiss-Prot : SWS_FT_FI1
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