eF-site ID 3j45-12TUY
PDB Code 3j45
Chain 1, 2, T, U, Y

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Title Structure of a non-translocating SecY protein channel with the 70S ribosome
Classification RIBOSOME/PROTEIN TRANSPORT
Compound Protein translocase subunit SecY
Source ORGANISM_SCIENTIFIC: Escherichia coli;
Sequence 1:  AAGGACGUGCUAAUCUGCGAUAAGCGUCGGUAAGGUGAUA
UGAACCGUUAUAACCGGCGAUUU
2:  AAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGA
T:  MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATK
AEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDW
KKAYVTLKEGQNLDFVGGAE
U:  AAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINL
VKKHQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKAD
RVGFRFEDGKKVRFFKSNSETIK
Y:  MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQS
HLLKQVRRDVARVKTLLNEKAGA
Description


Functional site
1) chain T
residue 1-66
type prosite
sequence MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATK
AEIKAAVQKLFEVEVEVVNTLVVKGK
description TONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mireerllkvlraphvsekastameksntivlkvakdatkaeikaavqklfevevevv.........................................................NTLVVKGK
source prosite : PS00430
2) chain T
residue 81-96
type prosite
sequence KKAYVTLKEGQNLDFV
description RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVTLKegqnldfV
source prosite : PS00050
3) chain U
residue 7-24
type prosite
sequence DDEVIVLTGKDKGKRGKV
description RIBOSOMAL_L24 Ribosomal protein L24 signature. DDeViVLtGkdKGkr.GkV
source prosite : PS01108
4) chain Y
residue 39-53
type prosite
sequence QSHLLKQVRRDVARV
description RIBOSOMAL_L29 Ribosomal protein L29 signature. QSHLLKqVRRDVARV
source prosite : PS00579

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