eF-site ID 3j2p-ABCD PDB Code 3j2p Chain A, B, C, D Title CryoEM structure of Dengue virus envelope protein heterotetramer Classification VIRAL PROTEIN Compound Envelope protein E Source ORGANISM_COMMON: DENV-2; ORGANISM_SCIENTIFIC: Dengue virus 2; Sequence A:  MRCIGISNRDFVEGVSGGSWVDIVLEHGSCVTTMAKNKPT LDFELIETEAKQPATLRKYCIEAKLTNTTTDSRCPTQGEP SLNEEQDKRFVCKHSMVDRGWGNGCGLFGKGGIVTCAMFT CKKNMKGKVVQPENLEYTIVITPHSGEEHAVGNDTGKHGK EIKITPQSSITEAELTGYGTVTMECSPRTGLDFNEMVLLQ MENKAWLVHRQWFLDLPLPWLPGADTQGSNWIQKETLVTF KNPHAKKQDVVVLGSQEGAMHTALTGATEIQMSSGNLLFT GHLKCRLRMDKLQLKGMSYSMCTGKFKVVKEIAETQHGTI VIRVQYEGDGSPCKIPFEIMDLEKRHVLGRLITVNPIVTE KDSPVNIEAEPPFGDSYIIIGVEPGQLKLNWFKKGSSIGQ MIETTMRGAKRMAILGDTAWDFGSLGGVFTSIGKALHQVF GAIYGAAFSGVSWIMKILIGVIITWIGMNSRSTSLSVSLV LVGVVTLYLGVMVQA B:  SVALVPHVGMGLETATETWMSSEGAWKHAQRIETWILRHP GFTIMAAILAYTIGTTHFQRALIFILLTAVAP C:  MRCIGISNRDFVEGVSGGSWVDIVLEHGSCVTTMAKNKPT LDFELIETEAKQPATLRKYCIEAKLTNTTTDSRCPTQGEP SLNEEQDKRFVCKHSMVDRGWGNGCGLFGKGGIVTCAMFT CKKNMKGKVVQPENLEYTIVITPHSGEEHAVGNDTGKHGK EIKITPQSSITEAELTGYGTVTMECSPRTGLDFNEMVLLQ MENKAWLVHRQWFLDLPLPWLPGADTQGSNWIQKETLVTF KNPHAKKQDVVVLGSQEGAMHTALTGATEIQMSSGNLLFT GHLKCRLRMDKLQLKGMSYSMCTGKFKVVKEIAETQHGTI VIRVQYEGDGSPCKIPFEIMDLEKRHVLGRLITVNPIVTE KDSPVNIEAEPPFGDSYIIIGVEPGQLKLNWFKKGSSIGQ MIETTMRGAKRMAILGDTAWDFGSLGGVFTSIGKALHQVF GAIYGAAFSGVSWIMKILIGVIITWIGMNSRSTSLSVSLV LVGVVTLYLGVMVQA D:  SVALVPHVGMGLETATETWMSSEGAWKHAQRIETWILRHP GFTIMAAILAYTIGTTHFQRALIFILLTAVAP Description (1)  Envelope protein E, Small envelope protein M Functional site 1) chain B residue 34-54 type TRANSMEM sequence TWILRHPGFTIMAAILAYTIG description Helical => ECO:0000255 source Swiss-Prot : SWS_FT_FI1 2) chain D residue 34-54 type TRANSMEM sequence TWILRHPGFTIMAAILAYTIG description Helical => ECO:0000255 source Swiss-Prot : SWS_FT_FI1 3) chain B residue 55-60 type TOPO_DOM sequence TTHFQR description Cytoplasmic => ECO:0000255 source Swiss-Prot : SWS_FT_FI2 4) chain D residue 55-60 type TOPO_DOM sequence TTHFQR description Cytoplasmic => ECO:0000255 source Swiss-Prot : SWS_FT_FI2 5) chain C residue 446-466 type TOPO_DOM sequence AAFSGVSWIMKILIGVIITWI description Cytoplasmic => ECO:0000255 source Swiss-Prot : SWS_FT_FI2 6) chain C residue 473-493 type TOPO_DOM sequence TSLSVSLVLVGVVTLYLGVMV description Cytoplasmic => ECO:0000255 source Swiss-Prot : SWS_FT_FI2 7) chain A residue 495 type SITE sequence A description Cleavage; by host signal peptidase => ECO:0000269|PubMed:2952760 source Swiss-Prot : SWS_FT_FI4 8) chain C residue 495 type SITE sequence A description Cleavage; by host signal peptidase => ECO:0000269|PubMed:2952760 source Swiss-Prot : SWS_FT_FI4 9) chain A residue 67 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|PROSITE-ProRule:PRU00498 source Swiss-Prot : SWS_FT_FI5 10) chain A residue 153 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|PROSITE-ProRule:PRU00498 source Swiss-Prot : SWS_FT_FI5 11) chain C residue 67 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|PROSITE-ProRule:PRU00498 source Swiss-Prot : SWS_FT_FI5 12) chain C residue 153 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|PROSITE-ProRule:PRU00498 source Swiss-Prot : SWS_FT_FI5

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