eF-site ID 3ihp-B
PDB Code 3ihp
Chain B

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Title Covalent Ubiquitin-Usp5 Complex
Classification HYDROLASE
Compound Ubiquitin carboxyl-terminal hydrolase 5
Source Homo sapiens (Human) (UBIQ_HUMAN)
Sequence B:  MAELSEEALLSVLPTIRVPKAGDRVHKDECAFSFDTPESE
GGLYICMNTFLGFGKQYVERHFNKTGQRVYLHLRRTDEDV
KIVILPDYLEIARDGLGGLPDIVRDRVTSAVEALLSVRQV
SKHAFSLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGS
ILCGRRYFDGSGGNNHAVEHYRETGYPLAVKLGTITPDGA
DVYSYDEDDMVLDPSLAEHLSHFGIDMPLKPLFGPGYTGI
RNLGNSCYLNSVVQVLFSIPDFQRKYVDKLEKIFQNAPTD
PTQDFSTQVAKLGHGLLSGEGIAPRMFKALIGKGHPEFST
NRQQDAQEFFLHLINMVERNCRSSENPNEVFRFLVEEKIK
CLATEKVKYTQRVDYIMQLPVPMDAALNKEELLEYEEKKR
QAEEEKMALPELVRAQVPFSSCLEAYGAPEQVDDFWSTAL
QAKSVAVKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVS
IEMPEELDISQLRGTGLQPGEEELPDILDESVIIQLVEMG
FPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANPLIL
DPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIF
SHIDDLDAEAAMDGPKVRDGPGKYQLFAFISHMGTSTMCG
HYVCHIKKEGRWVIYNDQKVCASEKPPKDLGYIYFYQRVA
S
Description


Functional site

1) chain B
residue 333
type
sequence N
description BINDING SITE FOR RESIDUE NEH D 76
source : AC2

2) chain B
residue 335
type
sequence C
description BINDING SITE FOR RESIDUE NEH D 76
source : AC2

3) chain B
residue 433
type
sequence Q
description BINDING SITE FOR RESIDUE NEH D 76
source : AC2

4) chain B
residue 794
type
sequence G
description BINDING SITE FOR RESIDUE NEH D 76
source : AC2

5) chain B
residue 199
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 836
source : AC5

6) chain B
residue 202
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 836
source : AC5

7) chain B
residue 219
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 836
source : AC5

8) chain B
residue 232
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 836
source : AC5

9) chain B
residue 175-283
type ZN_FING
sequence QVSKHAFSLKQLDNPARIPPCGWKCSKCDMRENLWLNLTD
GSILCGRRYFDGSGGNNHAVEHYRETGYPLAVKLGTITPD
GADVYSYDEDDMVLDPSLAEHLSHFGIDM
description UBP-type; degenerate => ECO:0000255|PROSITE-ProRule:PRU00502
source Swiss-Prot : SWS_FT_FI1

10) chain B
residue 779
type MOD_RES
sequence Q
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI10

11) chain B
residue 785
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI10

12) chain B
residue 783
type MOD_RES
sequence F
description Phosphoserine => ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI11

13) chain B
residue 335
type ACT_SITE
sequence C
description Nucleophile
source Swiss-Prot : SWS_FT_FI2

14) chain B
residue 818
type ACT_SITE
sequence E
description Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU10092, ECO:0000255|PROSITE-ProRule:PRU10093
source Swiss-Prot : SWS_FT_FI3

15) chain B
residue 199
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00502
source Swiss-Prot : SWS_FT_FI4

16) chain B
residue 202
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00502
source Swiss-Prot : SWS_FT_FI4

17) chain B
residue 219
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00502
source Swiss-Prot : SWS_FT_FI4

18) chain B
residue 232
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00502
source Swiss-Prot : SWS_FT_FI4

19) chain B
residue 264
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI5

20) chain B
residue 209
type BINDING
sequence W
description
source Swiss-Prot : SWS_FT_FI5

21) chain B
residue 221
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI5

22) chain B
residue 259
type BINDING
sequence Y
description
source Swiss-Prot : SWS_FT_FI5

23) chain B
residue 261
type BINDING
sequence Y
description
source Swiss-Prot : SWS_FT_FI5

24) chain B
residue 2
type MOD_RES
sequence A
description N-acetylalanine => ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:22223895, ECO:0007744|PubMed:22814378
source Swiss-Prot : SWS_FT_FI6

25) chain B
residue 156
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI7


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