eF-site ID 3ic1-AB PDB Code 3ic1 Chain A, B click to enlarge Title Crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase from Haemophilus influenzae Classification HYDROLASE Compound Succinyl-diaminopimelate desuccinylase Source null (DAPE_HAEIN) Sequence A:  MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQI EWMPFNDTLNLWAKHGTSEPVIAFAGHTDVVPTGDENQWS SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANP NHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM VGEPSSAKNLGDVVKNGRRGSITGNLYIQGIQYPHLAENP IHKAALFLQELTTYQWDKGNEFFPPTSLQIANIHAGTGSV IPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIE WNLSGKPFLTKPGKLLDSITSAIEETIGITPKAETGGGTS DGRFIALMGAEVVEFGPLNSTIHKVNECVSVEDLGKCGEI YHKMLVNLLD B:  MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQI EWMPFNDTLNLWAKHGTSEPVIAFAGHTDVVPTGDENQWS SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANP NHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM VGEPSSAKNLGDVVKNGRRGSITGNLYIQGIHLAENPIHK AALFLQELTTYQWDKGNEFFPPTSLQIANIHAGTGSNNVI PAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEW NLSGKPFLTKPGKLLDSITSAIEETIGITPKAETGGGTSD GRFIALMGAEVVEFGPLNSTIHKVNECVSVEDLGKCGEIY HKMLVNLLD Description Functional site 1) chain A residue 67 type sequence H description BINDING SITE FOR RESIDUE ZN A 1001 source : AC1 2) chain A residue 100 type sequence D description BINDING SITE FOR RESIDUE ZN A 1001 source : AC1 3) chain A residue 134 type sequence E description BINDING SITE FOR RESIDUE ZN A 1001 source : AC1 4) chain A residue 135 type sequence E description BINDING SITE FOR RESIDUE ZN A 1001 source : AC1 5) chain A residue 163 type sequence E description BINDING SITE FOR RESIDUE ZN A 1001 source : AC1 6) chain A residue 100 type sequence D description BINDING SITE FOR RESIDUE ZN A 1002 source : AC2 7) chain A residue 135 type sequence E description BINDING SITE FOR RESIDUE ZN A 1002 source : AC2 8) chain A residue 349 type sequence H description BINDING SITE FOR RESIDUE ZN A 1002 source : AC2 9) chain A residue 269 type sequence K description BINDING SITE FOR RESIDUE GOL A 3002 source : AC3 10) chain A residue 287 type sequence W description BINDING SITE FOR RESIDUE GOL A 3002 source : AC3 11) chain A residue 178 type sequence R description BINDING SITE FOR RESIDUE SO4 A 378 source : AC4 12) chain A residue 179 type sequence R description BINDING SITE FOR RESIDUE SO4 A 378 source : AC4 13) chain A residue 258 type sequence R description BINDING SITE FOR RESIDUE SO4 A 378 source : AC4 14) chain A residue 322 type sequence G description BINDING SITE FOR RESIDUE SO4 A 378 source : AC4 15) chain A residue 323 type sequence G description BINDING SITE FOR RESIDUE SO4 A 378 source : AC4 16) chain A residue 324 type sequence G description BINDING SITE FOR RESIDUE SO4 A 378 source : AC4 17) chain A residue 299 type sequence G description BINDING SITE FOR RESIDUE SO4 A 379 source : AC5 18) chain A residue 300 type sequence K description BINDING SITE FOR RESIDUE SO4 A 379 source : AC5 19) chain B residue 87 type sequence E description BINDING SITE FOR RESIDUE SO4 A 379 source : AC5 20) chain B residue 344 type sequence L description BINDING SITE FOR RESIDUE GOL B 3001 source : AC6 21) chain B residue 356 type sequence S description BINDING SITE FOR RESIDUE GOL B 3001 source : AC6 22) chain B residue 359 type sequence D description BINDING SITE FOR RESIDUE GOL B 3001 source : AC6 23) chain B residue 258 type sequence R description BINDING SITE FOR RESIDUE SO4 B 378 source : AC7 24) chain B residue 325 type sequence T description BINDING SITE FOR RESIDUE SO4 B 378 source : AC7 25) chain B residue 329 type sequence R description BINDING SITE FOR RESIDUE SO4 B 378 source : AC7 26) chain B residue 323 type sequence G description BINDING SITE FOR RESIDUE SO4 B 379 source : AC8 27) chain B residue 324 type sequence G description BINDING SITE FOR RESIDUE SO4 B 379 source : AC8 28) chain B residue 178 type sequence R description BINDING SITE FOR RESIDUE SO4 B 380 source : AC9 29) chain B residue 179 type sequence R description BINDING SITE FOR RESIDUE SO4 B 380 source : AC9 30) chain B residue 258 type sequence R description BINDING SITE FOR RESIDUE SO4 B 380 source : AC9 31) chain B residue 322 type sequence G description BINDING SITE FOR RESIDUE SO4 B 380 source : AC9 32) chain B residue 100 type sequence D description BINDING SITE FOR RESIDUE ZN B 1002 source : BC1 33) chain B residue 135 type sequence E description BINDING SITE FOR RESIDUE ZN B 1002 source : BC1 34) chain B residue 349 type sequence H description BINDING SITE FOR RESIDUE ZN B 1002 source : BC1 35) chain B residue 67 type sequence H description BINDING SITE FOR RESIDUE ZN B 1001 source : BC2 36) chain B residue 100 type sequence D description BINDING SITE FOR RESIDUE ZN B 1001 source : BC2 37) chain B residue 134 type sequence E description BINDING SITE FOR RESIDUE ZN B 1001 source : BC2 38) chain B residue 163 type sequence E description BINDING SITE FOR RESIDUE ZN B 1001 source : BC2 39) chain A residue 69 type ACT_SITE sequence D description ACT_SITE => ECO:0000305|PubMed:20138056 source Swiss-Prot : SWS_FT_FI1 40) chain B residue 69 type ACT_SITE sequence D description ACT_SITE => ECO:0000305|PubMed:20138056 source Swiss-Prot : SWS_FT_FI1 41) chain B residue 134 type ACT_SITE sequence E description Proton acceptor => ECO:0000269|PubMed:20138056 source Swiss-Prot : SWS_FT_FI2 42) chain A residue 134 type ACT_SITE sequence E description Proton acceptor => ECO:0000269|PubMed:20138056 source Swiss-Prot : SWS_FT_FI2 43) chain B residue 67 type BINDING sequence H description BINDING => ECO:0000269|PubMed:20138056, ECO:0007744|PDB:3IC1, ECO:0007744|PDB:3ISZ, ECO:0007744|PDB:4H2K source Swiss-Prot : SWS_FT_FI3 44) chain B residue 163 type BINDING sequence E description BINDING => ECO:0000269|PubMed:20138056, ECO:0007744|PDB:3IC1, ECO:0007744|PDB:3ISZ, ECO:0007744|PDB:4H2K source Swiss-Prot : SWS_FT_FI3 45) chain A residue 67 type BINDING sequence H description BINDING => ECO:0000269|PubMed:20138056, ECO:0007744|PDB:3IC1, ECO:0007744|PDB:3ISZ, ECO:0007744|PDB:4H2K source Swiss-Prot : SWS_FT_FI3 46) chain A residue 163 type BINDING sequence E description BINDING => ECO:0000269|PubMed:20138056, ECO:0007744|PDB:3IC1, ECO:0007744|PDB:3ISZ, ECO:0007744|PDB:4H2K source Swiss-Prot : SWS_FT_FI3 47) chain B residue 135 type BINDING sequence E description BINDING => ECO:0000269|PubMed:20138056, ECO:0007744|PDB:3IC1, ECO:0007744|PDB:4H2K source Swiss-Prot : SWS_FT_FI4 48) chain B residue 349 type BINDING sequence H description BINDING => ECO:0000269|PubMed:20138056, ECO:0007744|PDB:3IC1, ECO:0007744|PDB:4H2K source Swiss-Prot : SWS_FT_FI4 49) chain B residue 100 type BINDING sequence D description BINDING => ECO:0000269|PubMed:20138056, ECO:0007744|PDB:3IC1, ECO:0007744|PDB:4H2K source Swiss-Prot : SWS_FT_FI4 50) chain A residue 100 type BINDING sequence D description BINDING => ECO:0000269|PubMed:20138056, ECO:0007744|PDB:3IC1, ECO:0007744|PDB:4H2K source Swiss-Prot : SWS_FT_FI4 51) chain A residue 135 type BINDING sequence E description BINDING => ECO:0000269|PubMed:20138056, ECO:0007744|PDB:3IC1, ECO:0007744|PDB:4H2K source Swiss-Prot : SWS_FT_FI4 52) chain A residue 349 type BINDING sequence H description BINDING => ECO:0000269|PubMed:20138056, ECO:0007744|PDB:3IC1, ECO:0007744|PDB:4H2K source Swiss-Prot : SWS_FT_FI4 53) chain A residue 62-71 type prosite sequence IAFAGHTDVV description ARGE_DAPE_CPG2_1 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. IAFAGHtDVV source prosite : PS00758 54) chain A residue 98-137 type prosite sequence AADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEAT description ARGE_DAPE_CPG2_2 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. AADmKGslAamIvaaeeyvkanpnhkgt.IaLLItsDEEaT source prosite : PS00759

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