|
eF-site ID
|
3hoy-C |
PDB Code
|
3hoy |
Chain
|
C |
|
click to enlarge
|
|
Title
|
Complete RNA polymerase II elongation complex VI |
Classification
|
TRANSCRIPTION,TRANSFERASE/DNA/RNA HYBRID |
Compound
|
DNA-directed RNA polymerase II subunit RPB1 |
Source
|
ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; |
|
Sequence
|
C: |
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIP
TLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEY
SRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVS
NLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKG
IAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWP
QSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQ
VVVRGIDTLQKKVASILLALTQMDQD
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
C |
residue |
86 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN C 1269
|
source |
: AC5
|
|
2)
|
chain |
C |
residue |
88 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN C 1269
|
source |
: AC5
|
|
3)
|
chain |
C |
residue |
92 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN C 1269
|
source |
: AC5
|
|
4)
|
chain |
C |
residue |
95 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN C 1269
|
source |
: AC5
|
|
5)
|
chain |
C |
residue |
31-71 |
type |
prosite |
sequence |
NSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLI
P
|
description |
RNA_POL_D_30KD RNA polymerases D / 30 to 40 Kd subunits signature. NSLRRvmiaeiptlAidsVevetNtTvlaDEfIAhRLGLIP
|
source |
prosite : PS00446
|
|
|
|