eF-site ID 3hoy-A PDB Code 3hoy Chain A click to enlarge Title Complete RNA polymerase II elongation complex VI Classification TRANSCRIPTION,TRANSFERASE/DNA/RNA HYBRID Compound DNA-directed RNA polymerase II subunit RPB1 Source ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; Sequence A:  VGQQYSSAPLRTVKEVQFGLFSPEEVRAISVAKIRFPETM DETQTRAKIGGLNDPRLGSIDRNLKCQTCQEGMNECPGHF GHIDLAKPVFHVGFIAKIKKVCECVCMHCGKLLLDEHNEL MRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSEDDPTQL VSRGGCGNTQPTIRKDGLKLVGSWKKDEPELRVLSTEEIL NIFKHISVKDFTSLGFNEVFSRPEWMILTCLPVPPPPVRP SISFNESQRGEDDLTFKLADILKANISLETLEHNGAPHHA IEEAESLLQFHVATYMDNDIAGQPQALQKSGRPVKSIRAR LKGKEGRIRGNLMGKRVDFSARTVISGDPNLELDQVGVPK SIAKTLTYPEVVTPYNIDRLTQLVRNGPNEHPGAKYVIRD SGDRIDLRYSKRAGDIQLQYGWKVERHIMDNDPVLFNRQP SLHKMSMMAHRVKVIPYSTFRLNLSVTSPYNADFDGDEMN LHVPQSEETRAELSQLCAVPLQIVSPQSNKPCMGIVQDTL CGIRKLTLRDTFIELDQVLNMLYWVPDWDGVIPTPAIIKP KPLWSGKQILSVAIPNGIHLQRFDEGTTLLSPKDNGMLII DGQIIFGVVEKKTVGSSNGGLIHVVTREKGPQVCAKLFGN IQKVVNFWLLHNGFSTGIGDTIADGPTMREITETIAEAKK KVLDVTKEAQANLLTAKHGMTLRESFEDNVVRFLNEARDK AGRLAEVNLKDLNNVKQMVMAGSKGSFINIAQMSACVGQQ SVEGKRIAFGFVDRTLPHFSKDDYSPESKGFVENSYLRGL TPQEFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDI MVHYDNTTRNSLGNVIQFIYGEDGMDAAHIEKQSLDTIGG SDAAFEKRYRVDLLNTDHTLDPSLLESGSEILGDLKLQVL LDEEYKQLVKDRKFLREVFVDGEANWPLPVNIRRIIQNAQ QTFHIDHTKPSDLTIKDIVLGVKDLQENLLVLRGKNEIIQ NAQRDAVTLFCCLLRSRLATRRVLQEYRLTKQAFDWVLSN IEAQFLRSVVHPGEMVGVLAAQSIGEPATQMTLSKKVTSG VPRLKEILNVAKNMKTPSLTVYLEPGHAADQEQAKLIRSA IEHTTLKSVTIASEIYYDPDPRSTVIPEDEEIIQLHFSLQ QSPWLLRLELDRAAMNDKDLTMGQVGERIKQTFKNDLFVI WSEDNDEKLIIRCRVVRAEEDHMLKKIENTMLENITLRGV ENIERVVMMKYDRKVPSPTGEYVKEPEWVLETDGVNLSEV MTVPGIDPTRIYTNSFIDIMEVLGIEAGRAALYKEVYNVI ASDGSYVNYRHMALLVDVMTTQGGLTSVTRHGFNRSNTGA LMRCSFEETVEILFEAGASAELDDCRGVSENVILGQMAPI GTGAFDVMIDEESLVKYMP Description Functional site 1) chain A residue 107 type sequence C description BINDING SITE FOR RESIDUE ZN A 2456 source : AC1 2) chain A residue 108 type sequence M description BINDING SITE FOR RESIDUE ZN A 2456 source : AC1 3) chain A residue 110 type sequence C description BINDING SITE FOR RESIDUE ZN A 2456 source : AC1 4) chain A residue 148 type sequence C description BINDING SITE FOR RESIDUE ZN A 2456 source : AC1 5) chain A residue 167 type sequence C description BINDING SITE FOR RESIDUE ZN A 2456 source : AC1 6) chain A residue 67 type sequence C description BINDING SITE FOR RESIDUE ZN A 2457 source : AC2 7) chain A residue 70 type sequence C description BINDING SITE FOR RESIDUE ZN A 2457 source : AC2 8) chain A residue 77 type sequence C description BINDING SITE FOR RESIDUE ZN A 2457 source : AC2 9) chain A residue 80 type sequence H description BINDING SITE FOR RESIDUE ZN A 2457 source : AC2 10) chain A residue 481 type sequence D description BINDING SITE FOR RESIDUE MG A 2458 source : AC3 11) chain A residue 483 type sequence D description BINDING SITE FOR RESIDUE MG A 2458 source : AC3 12) chain A residue 485 type sequence D description BINDING SITE FOR RESIDUE MG A 2458 source : AC3 13) chain A residue 483 type catalytic sequence D description 788 source MCSA : MCSA1 14) chain A residue 485 type catalytic sequence D description 788 source MCSA : MCSA1 15) chain A residue 483 type ZN_FING sequence D description C4-type source Swiss-Prot : SWS_FT_FI1 16) chain A residue 485 type ZN_FING sequence D description C4-type source Swiss-Prot : SWS_FT_FI1 17) chain A residue 107 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 18) chain A residue 110 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 19) chain A residue 148 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 20) chain A residue 167 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 21) chain A residue 481 type ZN_FING sequence D description C4-type source Swiss-Prot : SWS_FT_FI1

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