eF-site ID 3hov-B PDB Code 3hov Chain B click to enlarge Title Complete RNA polymerase II elongation complex II Classification TRANSCRIPTION, TRANSFERASE/DNA/RNA Compound DNA-directed RNA polymerase II subunit RPB1 Source ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; Sequence B:  DESAPITAEDSWAVISAFFREKGLVSQQLDSFNQFVDYTL QDIICEDSTLIISFGKIYVTKPMVNESDGVTHALYPQEAR LRNLTYSSGLFVDVKKKVFIGRLPIMLRSKNCYLSEATES DLYKLKECPFDMGGYFIINGSEKVLIAQERSAGNIVQVFK KAAPSPISHVAEIRSALEKGSRFISTLQVKLYGREGSSAR TIKATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDVND WQMLEMLKPCVEDGFVIQDRETALDFIGRKEKRIQYAKDI LQKEFLPHITQLEGFESRKAFFLGYMINRLLLCALDRKDQ DDRDHFGKKRLDLAGPLLAQLFKTLFKKLTKDIFRYMQRT VELAINAKTITSGLKYALATGNWGEQKAMSSRAGVSQVLN RYTYSSTLSHLRRTNTPILAKPRQLHNTHWGLVCPAETPE GQACGLVKNLSLMSCISVGTDPMPIITFLSEWGMEPLEDY VPHQSPDATRVFVNGVWHGVHRNPARLMETLRTLRRKGDI NPEVSMIRDIREKELKIFTDAGRVYRPLFIVEDDESLGHK ELKVRKGHIAKLMATEYQDEYTWSSLLNEGLVEYIDAEEE ESILIAMQPEDLEPAEADVDPAKRIRVSHHATTFTHCEIH PSMILGVAASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTN YNVRMDTMANILYYPQKPLGTTRAMEYLKFRELPAGQNAI VAIACYSGYNQEDSMIMNQSSIDRGLFRSLFFRSYMDQEK KYGMSITETFEKPQRTRMKHGTYDKLDDDGLIAPGVRVSG EDVIIGKTTPISSKRDASTPLRSTENGIVDQVLVTTNQDG LKFVKVRVRTTKIPQIGDKFASRHGQKGTIGITYRREDMP FTAEGIVPDLIINPHAIPSRMTVAHLIECLLSKVAALSGN EGDASPFTDITVEGISKLLREHGYQSRGFEVMYNGHTGKK LMAQIFFGPTYYQRLRHMVDDKIHARARGPMQVLTRQPVE GRSRDGGLRFGEMERDCMIAHGAASFLKERLMEASDAFRV HICGICGLMTVIAKLNHNQFECKGCDNKIDIYQIHIPYAA KLLFQELMAMNITPRLYTDRSRDF Description Functional site 1) chain B residue 1163 type sequence C description BINDING SITE FOR RESIDUE ZN B 2225 source : AC4 2) chain B residue 1166 type sequence C description BINDING SITE FOR RESIDUE ZN B 2225 source : AC4 3) chain B residue 1182 type sequence C description BINDING SITE FOR RESIDUE ZN B 2225 source : AC4 4) chain B residue 1185 type sequence C description BINDING SITE FOR RESIDUE ZN B 2225 source : AC4 5) chain B residue 837 type catalytic sequence D description 788 source MCSA : MCSA1 6) chain B residue 977-989 type prosite sequence GDKFASRHGQKGT description RNA_POL_BETA RNA polymerases beta chain signature. GdKFASrHGQKGT source prosite : PS01166 7) chain B residue 1166 type MOD_RES sequence C description Phosphothreonine => ECO:0007744|PubMed:19779198 source Swiss-Prot : SWS_FT_FI2 8) chain B residue 1182 type MOD_RES sequence C description Phosphothreonine => ECO:0007744|PubMed:19779198 source Swiss-Prot : SWS_FT_FI2 9) chain B residue 1185 type MOD_RES sequence C description Phosphothreonine => ECO:0007744|PubMed:19779198 source Swiss-Prot : SWS_FT_FI2 10) chain B residue 919 type MOD_RES sequence S description Phosphoserine => ECO:0007744|PubMed:17330950, ECO:0007744|PubMed:18407956 source Swiss-Prot : SWS_FT_FI3

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