eF-site ID 3hov-C
PDB Code 3hov
Chain C

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Title Complete RNA polymerase II elongation complex II
Classification TRANSCRIPTION, TRANSFERASE/DNA/RNA
Compound DNA-directed RNA polymerase II subunit RPB1
Source ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae;
Sequence C:  EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIP
TLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEY
SRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVS
NLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKG
IAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWP
QSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQ
VVVRGIDTLQKKVASILLALTQMDQD
Description


Functional site
1) chain C
residue 86
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1269
source : AC5
2) chain C
residue 88
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1269
source : AC5
3) chain C
residue 91
type
sequence H
description BINDING SITE FOR RESIDUE ZN C 1269
source : AC5
4) chain C
residue 92
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1269
source : AC5
5) chain C
residue 95
type
sequence C
description BINDING SITE FOR RESIDUE ZN C 1269
source : AC5
6) chain C
residue 31-71
type prosite
sequence NSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLI
P
description RNA_POL_D_30KD RNA polymerases D / 30 to 40 Kd subunits signature. NSLRRvmiaeiptlAidsVevetNtTvlaDEfIAhRLGLIP
source prosite : PS00446

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