eF-site ID 3hmg-ABCDEF PDB Code 3hmg Chain A, B, C, D, E, F click to enlarge Title REFINEMENT OF THE INFLUENZA VIRUS HEMAGGLUTININ BY SIMULATED ANNEALING Classification VIRAL PROTEIN Compound HEMAGGLUTININ Source Influenza A virus (strain A/Aichi/2/1968 H3N2) (HEMA_IAAIC) Sequence A:  QDLPGNDNSTATLCLGHHAVPNGTLVKTITDDQIEVTNAT ELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQ NETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF ITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGST YPVLNVTMPNNDNFDKLYIWGIHHPSTNQEQTSLYVQASG RVTVSTRRSQQTIIPNIGSRPWVRGQSSRISIYWTIVKPG DVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISE CITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGM RNVPEKQT B:  GLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKS TQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDL EKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFE KTRRQLRENAEEMGNGCFKIYHKCDNACIESIRNGTYDHD VYRDEALNNRFQIKG C:  QDLPGNDNSTATLCLGHHAVPNGTLVKTITDDQIEVTNAT ELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQ NETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF ITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGST YPVLNVTMPNNDNFDKLYIWGIHHPSTNQEQTSLYVQASG RVTVSTRRSQQTIIPNIGSRPWVRGQSSRISIYWTIVKPG DVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISE CITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGM RNVPEKQT D:  GLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKS TQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDL EKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFE KTRRQLRENAEEMGNGCFKIYHKCDNACIESIRNGTYDHD VYRDEALNNRFQIKG E:  QDLPGNDNSTATLCLGHHAVPNGTLVKTITDDQIEVTNAT ELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQ NETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF ITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGST YPVLNVTMPNNDNFDKLYIWGIHHPSTNQEQTSLYVQASG RVTVSTRRSQQTIIPNIGSRPWVRGQSSRISIYWTIVKPG DVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISE CITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGM RNVPEKQT F:  GLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKS TQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDL EKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFE KTRRQLRENAEEMGNGCFKIYHKCDNACIESIRNGTYDHD VYRDEALNNRFQIKG Description (1)  HEMAGGLUTININ (L226(A)Q) (BROMELAIN DIGESTED) (MUTANT WITH LEU 226 REPLACED BY GLN IN HA1 CHAINS) Functional site 1) chain B residue 154 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 2) chain C residue 81 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 3) chain C residue 165 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 4) chain C residue 285 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 5) chain E residue 8 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 6) chain E residue 22 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 7) chain E residue 38 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 8) chain E residue 81 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 9) chain E residue 165 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 10) chain E residue 285 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 11) chain D residue 154 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 12) chain F residue 154 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 13) chain A residue 81 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 14) chain A residue 165 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 15) chain A residue 285 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 16) chain C residue 8 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 17) chain C residue 22 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 18) chain C residue 38 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1

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