eF-site ID 3hl2-D
PDB Code 3hl2
Chain D

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Title The crystal structure of the human SepSecS-tRNASec complex
Classification TRANSFERASE
Compound O-phosphoseryl-tRNA(Sec) selenium transferase
Source Homo sapiens (Human) (3HL2)
Sequence D:  EARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELAIMD
SNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDIS
AVQPKAAGSSLLNKITNSLVLDIIKLAGVHTVANCFVVPM
ATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITA
GFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHS
TTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKC
MHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSF
IQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERK
EMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDE
HRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGF
MSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVR
K
Description


Functional site

1) chain D
residue 75
type
sequence R
description BINDING SITE FOR RESIDUE PLR D 1001
source : AC9

2) chain D
residue 143
type
sequence A
description BINDING SITE FOR RESIDUE PLR D 1001
source : AC9

3) chain D
residue 144
type
sequence T
description BINDING SITE FOR RESIDUE PLR D 1001
source : AC9

4) chain D
residue 145
type
sequence G
description BINDING SITE FOR RESIDUE PLR D 1001
source : AC9

5) chain D
residue 172
type
sequence Q
description BINDING SITE FOR RESIDUE PLR D 1001
source : AC9

6) chain D
residue 174
type
sequence S
description BINDING SITE FOR RESIDUE PLR D 1001
source : AC9

7) chain D
residue 175
type
sequence C
description BINDING SITE FOR RESIDUE PLR D 1001
source : AC9

8) chain D
residue 252
type
sequence N
description BINDING SITE FOR RESIDUE PLR D 1001
source : AC9

9) chain D
residue 254
type
sequence A
description BINDING SITE FOR RESIDUE PLR D 1001
source : AC9

10) chain D
residue 255
type
sequence Y
description BINDING SITE FOR RESIDUE PLR D 1001
source : AC9

11) chain D
residue 284
type
sequence K
description BINDING SITE FOR RESIDUE PLR D 1001
source : AC9

12) chain D
residue 312
type
sequence G
description BINDING SITE FOR RESIDUE PLR D 1001
source : AC9

13) chain D
residue 313
type
sequence R
description BINDING SITE FOR RESIDUE PLR D 1001
source : AC9

14) chain D
residue 74
type
sequence E
description BINDING SITE FOR RESIDUE SEP D 2001
source : BC1

15) chain D
residue 75
type
sequence R
description BINDING SITE FOR RESIDUE SEP D 2001
source : BC1

16) chain D
residue 97
type
sequence R
description BINDING SITE FOR RESIDUE SEP D 2001
source : BC1

17) chain D
residue 98
type
sequence S
description BINDING SITE FOR RESIDUE SEP D 2001
source : BC1

18) chain D
residue 99
type
sequence G
description BINDING SITE FOR RESIDUE SEP D 2001
source : BC1

19) chain D
residue 105
type
sequence Q
description BINDING SITE FOR RESIDUE SEP D 2001
source : BC1

20) chain D
residue 172
type
sequence Q
description BINDING SITE FOR RESIDUE SEP D 2001
source : BC1

21) chain D
residue 173
type
sequence K
description BINDING SITE FOR RESIDUE SEP D 2001
source : BC1

22) chain D
residue 284
type
sequence K
description BINDING SITE FOR RESIDUE SEP D 2001
source : BC1

23) chain D
residue 313
type
sequence R
description BINDING SITE FOR RESIDUE SEP D 2001
source : BC1

24) chain D
residue 199
type
sequence R
description BINDING SITE FOR RESIDUE SEP D 2002
source : BC2

25) chain D
residue 234
type
sequence R
description BINDING SITE FOR RESIDUE SEP D 2002
source : BC2

26) chain D
residue 368
type
sequence H
description BINDING SITE FOR RESIDUE SEP D 2002
source : BC2

27) chain D
residue 74
type SITE
sequence E
description May act as a substrate filter by repelling compounds with a negatively charged alpha-carboxylate => ECO:0000250|UniProtKB:Q6P6M7
source Swiss-Prot : SWS_FT_FI2

28) chain D
residue 75
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:19608919
source Swiss-Prot : SWS_FT_FI1

29) chain D
residue 97
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:19608919
source Swiss-Prot : SWS_FT_FI1

30) chain D
residue 98
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:19608919
source Swiss-Prot : SWS_FT_FI1

31) chain D
residue 105
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:19608919
source Swiss-Prot : SWS_FT_FI1

32) chain D
residue 271
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:19608919
source Swiss-Prot : SWS_FT_FI1

33) chain D
residue 313
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:19608919
source Swiss-Prot : SWS_FT_FI1

34) chain D
residue 398
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:19608919
source Swiss-Prot : SWS_FT_FI1

35) chain D
residue 463
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:19608919
source Swiss-Prot : SWS_FT_FI1

36) chain D
residue 284
type MOD_RES
sequence K
description N6-(pyridoxal phosphate)lysine => ECO:0000269|PubMed:19608919
source Swiss-Prot : SWS_FT_FI4


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