eF-site ID 3h1u-B
PDB Code 3h1u
Chain B

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Title Structure of ubiquitin in complex with Cd ions
Classification SIGNALING PROTEIN
Compound Ubiquitin
Source ORGANISM_COMMON: bovine; ORGANISM_SCIENTIFIC: Bos taurus;
Sequence B:  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
Description


Functional site

1) chain B
residue 18
type
sequence E
description BINDING SITE FOR RESIDUE CD B 77
source : AC4

2) chain B
residue 18
type
sequence E
description BINDING SITE FOR RESIDUE CD B 77
source : AC4

3) chain B
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE CD B 77
source : AC4

4) chain B
residue 29
type
sequence K
description BINDING SITE FOR RESIDUE CD B 77
source : AC4

5) chain B
residue 1
type
sequence M
description BINDING SITE FOR RESIDUE CD B 78
source : AC5

6) chain B
residue 16
type
sequence E
description BINDING SITE FOR RESIDUE CD B 78
source : AC5

7) chain B
residue 32
type
sequence D
description BINDING SITE FOR RESIDUE CD B 78
source : AC5

8) chain B
residue 54
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

9) chain B
residue 72
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

10) chain B
residue 68
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

11) chain B
residue 65
type MOD_RES
sequence S
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI3

12) chain B
residue 27
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

13) chain B
residue 29
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

14) chain B
residue 33
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

15) chain B
residue 48
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

16) chain B
residue 63
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

17) chain B
residue 6
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

18) chain B
residue 11
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5


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