|
|
eF-site ID
|
3gtl-J |
|
PDB Code
|
3gtl |
|
Chain
|
J |
|
click to enlarge
|
|
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Title
|
Backtracked RNA polymerase II complex with 13mer with G<>U mismatch |
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Classification
|
TRANSCRIPTION, TRANSFERASE/DNA-RNA HYBRID |
|
Compound
|
DNA-directed RNA polymerase II subunit RPB1 |
|
Source
|
ORGANISM_COMMON: yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; |
|
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Sequence
|
J: |
MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLG
LKRYCCRRMILTHVDLIEKFLRYNP
|
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Description
|
|
Functional site
|
|
|
1)
|
chain |
J |
| residue |
7 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN J 101
|
| source |
: AC7
|
|
|
2)
|
chain |
J |
| residue |
10 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN J 101
|
| source |
: AC7
|
|
|
3)
|
chain |
J |
| residue |
45 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN J 101
|
| source |
: AC7
|
|
|
4)
|
chain |
J |
| residue |
46 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN J 101
|
| source |
: AC7
|
|
|
5)
|
chain |
J |
| residue |
2-11 |
| type |
prosite |
| sequence |
IVPVRCFSCG
|
| description |
RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IVPVrCFSCG
|
| source |
prosite : PS01112
|
|
|
6)
|
chain |
J |
| residue |
46 |
| type |
ZN_FING |
| sequence |
C
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
7)
|
chain |
J |
| residue |
10 |
| type |
ZN_FING |
| sequence |
C
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
8)
|
chain |
J |
| residue |
45 |
| type |
ZN_FING |
| sequence |
C
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|