|
eF-site ID
|
3gtg-J |
PDB Code
|
3gtg |
Chain
|
J |
|
click to enlarge
|
|
Title
|
Backtracked RNA polymerase II complex with 12mer RNA |
Classification
|
TRANSCRIPTION, TRANSFERASE/DNA/RNA HYBRID |
Compound
|
DNA-directed RNA polymerase II subunit RPB1 |
Source
|
ORGANISM_COMMON: yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; |
|
Sequence
|
J: |
MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLG
LKRYCCRRMILTHVDLIEKFLRYNP
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
J |
residue |
7 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN J 101
|
source |
: AC7
|
|
2)
|
chain |
J |
residue |
9 |
type |
|
sequence |
S
|
description |
BINDING SITE FOR RESIDUE ZN J 101
|
source |
: AC7
|
|
3)
|
chain |
J |
residue |
10 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN J 101
|
source |
: AC7
|
|
4)
|
chain |
J |
residue |
45 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN J 101
|
source |
: AC7
|
|
5)
|
chain |
J |
residue |
46 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN J 101
|
source |
: AC7
|
|
6)
|
chain |
J |
residue |
2-11 |
type |
prosite |
sequence |
IVPVRCFSCG
|
description |
RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IVPVrCFSCG
|
source |
prosite : PS01112
|
|
|
|