|
|
eF-site ID
|
3gpq-D |
|
PDB Code
|
3gpq |
|
Chain
|
D |
|
click to enlarge
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Title
|
Crystal structure of macro domain of Chikungunya virus in complex with RNA |
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Classification
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VIRAL PROTEIN/RNA |
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Compound
|
Non-structural protein 3 |
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Source
|
Chikungunya virus (strain S27-African prototype) (CHIKV) (3GPQ) |
|
|
Sequence
|
D: |
PSYRVKRMDIAKNDEECVVNAANPRGLPGDGVCKAVYKKW
PESFKNSATPVGTAKTVMCGTYPVIHAVGPNFSNSEEGDR
ELAAAYREVAKEVTRLGVNSVAIPLLSTGVYSGGKDRLTQ
SLNHLFTAMDSTDVVIYCRDKEWEKKIS
|
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Description
|
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Functional site
|
|
|
1)
|
chain |
D |
| residue |
10 |
| type |
BINDING |
| sequence |
D
|
| description |
BINDING => ECO:0000269|PubMed:19386706
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
2)
|
chain |
D |
| residue |
24 |
| type |
BINDING |
| sequence |
N
|
| description |
BINDING => ECO:0000269|PubMed:19386706
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
3)
|
chain |
D |
| residue |
32 |
| type |
BINDING |
| sequence |
G
|
| description |
BINDING => ECO:0000269|PubMed:19386706
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
4)
|
chain |
D |
| residue |
112 |
| type |
BINDING |
| sequence |
G
|
| description |
BINDING => ECO:0000269|PubMed:19386706
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
5)
|
chain |
D |
| residue |
113 |
| type |
BINDING |
| sequence |
V
|
| description |
BINDING => ECO:0000269|PubMed:19386706
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
6)
|
chain |
D |
| residue |
114 |
| type |
BINDING |
| sequence |
Y
|
| description |
BINDING => ECO:0000269|PubMed:19386706
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|