|
eF-site ID
|
3gpq-B |
PDB Code
|
3gpq |
Chain
|
B |
|
click to enlarge
|
|
Title
|
Crystal structure of macro domain of Chikungunya virus in complex with RNA |
Classification
|
VIRAL PROTEIN/RNA |
Compound
|
Non-structural protein 3 |
Source
|
Chikungunya virus (strain S27-African prototype) (CHIKV) (3GPQ) |
|
Sequence
|
B: |
APSYRVKRMDIAKNDEECVVNAANPRGLPGDGVCKAVYKK
WPESFKNSATPVGTAKTVMCGTYPVIHAVGPNFSNYSESE
GDRELAAAYREVAKEVTRLGVNSVAIPLLSTGVYSGGKDR
LTQSLNHLFTAMDSTDADVVIYCRDKEWEKKISEAIQMRT
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
B |
residue |
112 |
type |
BINDING |
sequence |
G
|
description |
BINDING => ECO:0000269|PubMed:19386706
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
2)
|
chain |
B |
residue |
113 |
type |
BINDING |
sequence |
V
|
description |
BINDING => ECO:0000269|PubMed:19386706
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
3)
|
chain |
B |
residue |
114 |
type |
BINDING |
sequence |
Y
|
description |
BINDING => ECO:0000269|PubMed:19386706
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
4)
|
chain |
B |
residue |
10 |
type |
BINDING |
sequence |
D
|
description |
BINDING => ECO:0000269|PubMed:19386706
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
5)
|
chain |
B |
residue |
24 |
type |
BINDING |
sequence |
N
|
description |
BINDING => ECO:0000269|PubMed:19386706
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
6)
|
chain |
B |
residue |
32 |
type |
BINDING |
sequence |
G
|
description |
BINDING => ECO:0000269|PubMed:19386706
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|