eF-site ID 3gpq-ABCD PDB Code 3gpq Chain A, B, C, D click to enlarge Title Crystal structure of macro domain of Chikungunya virus in complex with RNA Classification VIRAL PROTEIN/RNA Compound Non-structural protein 3 Source Chikungunya virus (strain S27-African prototype) (CHIKV) (3GPQ) Sequence A:  APSYRVKRMDIAKNDEECVVNAANPRGLPGDGVCKAVYKK WPESFKNSATPVGTAKTVMCGTYPVIHAVGPNFSNYSESE GDRELAAAYREVAKEVTRLGVNSVAIPLLSTGVYSGGKDR LTQSLNHLFTAMDSTDADVVIYCRDKEWEKKISEAIQMRT B:  APSYRVKRMDIAKNDEECVVNAANPRGLPGDGVCKAVYKK WPESFKNSATPVGTAKTVMCGTYPVIHAVGPNFSNYSESE GDRELAAAYREVAKEVTRLGVNSVAIPLLSTGVYSGGKDR LTQSLNHLFTAMDSTDADVVIYCRDKEWEKKISEAIQMRT C:  APSYRVKRMDIAKNDEECVVNAANPGLCKAVYKKWPESFK NSATPVGTAVMCGTYPVIHAVGPNFSNYSESEGDRELAAA YREVAKEVTRLGVNSAIPLLSTGVYSGGKDRLTQSLNHLF TAMDSTDADVVIYCRDKEWEKKISEAIQMR D:  PSYRVKRMDIAKNDEECVVNAANPRGLPGDGVCKAVYKKW PESFKNSATPVGTAKTVMCGTYPVIHAVGPNFSNSEEGDR ELAAAYREVAKEVTRLGVNSVAIPLLSTGVYSGGKDRLTQ SLNHLFTAMDSTDVVIYCRDKEWEKKIS Description Functional site 1) chain A residue 10 type BINDING sequence D description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 2) chain B residue 112 type BINDING sequence G description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 3) chain B residue 113 type BINDING sequence V description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 4) chain B residue 114 type BINDING sequence Y description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 5) chain C residue 10 type BINDING sequence D description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 6) chain C residue 24 type BINDING sequence N description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 7) chain C residue 112 type BINDING sequence G description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 8) chain C residue 113 type BINDING sequence V description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 9) chain C residue 114 type BINDING sequence Y description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 10) chain D residue 10 type BINDING sequence D description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 11) chain A residue 24 type BINDING sequence N description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 12) chain D residue 24 type BINDING sequence N description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 13) chain D residue 32 type BINDING sequence G description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 14) chain D residue 112 type BINDING sequence G description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 15) chain D residue 113 type BINDING sequence V description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 16) chain D residue 114 type BINDING sequence Y description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 17) chain A residue 32 type BINDING sequence G description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 18) chain A residue 112 type BINDING sequence G description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 19) chain A residue 113 type BINDING sequence V description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 20) chain A residue 114 type BINDING sequence Y description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 21) chain B residue 10 type BINDING sequence D description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 22) chain B residue 24 type BINDING sequence N description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1 23) chain B residue 32 type BINDING sequence G description BINDING => ECO:0000269|PubMed:19386706 source Swiss-Prot : SWS_FT_FI1

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