eF-site ID 3gp9-B PDB Code 3gp9 Chain B click to enlarge Title Crystal structure of the Mimivirus NDK complexed with GDP Classification TRANSFERASE Compound Nucleoside diphosphate kinase Source Acanthamoeba polyphaga mimivirus (APMV) (NDK_MIMIV) Sequence B:  LQRTLVLIKPDAFERSLVAEIMGRIEKKNFKIVSMKFWSK APRNLIEQHYKEHSEQSYFNDNCDFMVSGPIISIVYEGTD AISKIRRLQGNILTPGTIRGDLANDIRENLIHASDSEDSA VDEISIWFPE Description Functional site 1) chain B residue 9 type sequence K description BINDING SITE FOR RESIDUE GDP B 138 source : AC4 2) chain B residue 50 type sequence Y description BINDING SITE FOR RESIDUE GDP B 138 source : AC4 3) chain B residue 53 type sequence H description BINDING SITE FOR RESIDUE GDP B 138 source : AC4 4) chain B residue 58 type sequence Y description BINDING SITE FOR RESIDUE GDP B 138 source : AC4 5) chain B residue 62 type sequence N description BINDING SITE FOR RESIDUE GDP B 138 source : AC4 6) chain B residue 86 type sequence R description BINDING SITE FOR RESIDUE GDP B 138 source : AC4 7) chain B residue 89 type sequence Q description BINDING SITE FOR RESIDUE GDP B 138 source : AC4 8) chain B residue 99 type sequence R description BINDING SITE FOR RESIDUE GDP B 138 source : AC4 9) chain B residue 106 type sequence I description BINDING SITE FOR RESIDUE GDP B 138 source : AC4 10) chain B residue 107 type sequence R description BINDING SITE FOR RESIDUE GDP B 138 source : AC4 11) chain B residue 109 type sequence N description BINDING SITE FOR RESIDUE GDP B 138 source : AC4 12) chain B residue 112 type sequence H description BINDING SITE FOR RESIDUE GDP B 138 source : AC4 13) chain B residue 91 type sequence N description BINDING SITE FOR RESIDUE PO4 B 139 source : AC5 14) chain B residue 92 type sequence I description BINDING SITE FOR RESIDUE PO4 B 139 source : AC5 15) chain B residue 99 type sequence R description BINDING SITE FOR RESIDUE PO4 B 139 source : AC5 16) chain B residue 105 type sequence D description BINDING SITE FOR RESIDUE PO4 B 139 source : AC5 17) chain B residue 109 type sequence N description BINDING SITE FOR RESIDUE PO4 B 139 source : AC5 18) chain B residue 86 type sequence R description BINDING SITE FOR RESIDUE MG B 140 source : AC6 19) chain B residue 89 type sequence Q description BINDING SITE FOR RESIDUE MG B 140 source : AC6 20) chain B residue 112 type sequence H description BINDING SITE FOR RESIDUE MG B 140 source : AC6 21) chain B residue 113 type sequence A description BINDING SITE FOR RESIDUE MG B 140 source : AC6 22) chain B residue 112 type ACT_SITE sequence H description Pros-phosphohistidine intermediate => ECO:0000255|PROSITE-ProRule:PRU10030 source Swiss-Prot : SWS_FT_FI1 23) chain B residue 109 type BINDING sequence N description source Swiss-Prot : SWS_FT_FI2 24) chain B residue 9 type BINDING sequence K description source Swiss-Prot : SWS_FT_FI2 25) chain B residue 58 type BINDING sequence Y description source Swiss-Prot : SWS_FT_FI2 26) chain B residue 86 type BINDING sequence R description source Swiss-Prot : SWS_FT_FI2 27) chain B residue 99 type BINDING sequence R description source Swiss-Prot : SWS_FT_FI2

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