eF-site ID 3fbe-B
PDB Code 3fbe
Chain B

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Title Crystal structure of the Mimivirus NDK N62L-R107G double mutant complexed with GDP
Classification TRANSFERASE
Compound Nucleoside diphosphate kinase
Source (NDK_MIMIV)
Sequence B:  LQRTLVLIKPDAFERSLVAEIMGRIEKKNFKIVSMKFWSK
APRNLIEQHYKEHSEQSYFNDLCDFMVSGPIISIVYEGTD
AISKIRRLQGNILTPGTIRGDLANDIGENLIHASDSEDSA
VDEISIWFP
Description


Functional site

1) chain B
residue 53
type
sequence H
description BINDING SITE FOR RESIDUE GDP B 138
source : AC3

2) chain B
residue 62
type
sequence L
description BINDING SITE FOR RESIDUE GDP B 138
source : AC3

3) chain B
residue 86
type
sequence R
description BINDING SITE FOR RESIDUE GDP B 138
source : AC3

4) chain B
residue 89
type
sequence Q
description BINDING SITE FOR RESIDUE GDP B 138
source : AC3

5) chain B
residue 90
type
sequence G
description BINDING SITE FOR RESIDUE GDP B 138
source : AC3

6) chain B
residue 99
type
sequence R
description BINDING SITE FOR RESIDUE GDP B 138
source : AC3

7) chain B
residue 106
type
sequence I
description BINDING SITE FOR RESIDUE GDP B 138
source : AC3

8) chain B
residue 109
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI2

9) chain B
residue 9
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI2

10) chain B
residue 58
type BINDING
sequence Y
description
source Swiss-Prot : SWS_FT_FI2

11) chain B
residue 86
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

12) chain B
residue 99
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

13) chain B
residue 112
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|PROSITE-ProRule:PRU10030
source Swiss-Prot : SWS_FT_FI1


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