eF-site ID 3fbc-D
PDB Code 3fbc
Chain D

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Title Crystal structure of the Mimivirus NDK N62L-R107G double mutant complexed with dTDP
Classification TRANSFERASE
Compound Nucleoside diphosphate kinase
Source (NDK_MIMIV)
Sequence D:  GLQRTLVLIKPDAFERSLVAEIMGRIEKKNFKIVSMKFWS
KAPRNLIEQHYKEHSEQSYFNDLCDFMVSGPIISIVYEGT
DAISKIRRLQGNILTPGTIRGDLANDIGENLIHASDSEDS
AVDEISIWFPE
Description


Functional site

1) chain D
residue 86
type
sequence R
description BINDING SITE FOR RESIDUE MG D 163
source : BC1

2) chain D
residue 115
type
sequence D
description BINDING SITE FOR RESIDUE MG D 163
source : BC1

3) chain D
residue 9
type
sequence K
description BINDING SITE FOR RESIDUE TYD D 138
source : BC2

4) chain D
residue 53
type
sequence H
description BINDING SITE FOR RESIDUE TYD D 138
source : BC2

5) chain D
residue 58
type
sequence Y
description BINDING SITE FOR RESIDUE TYD D 138
source : BC2

6) chain D
residue 62
type
sequence L
description BINDING SITE FOR RESIDUE TYD D 138
source : BC2

7) chain D
residue 86
type
sequence R
description BINDING SITE FOR RESIDUE TYD D 138
source : BC2

8) chain D
residue 99
type
sequence R
description BINDING SITE FOR RESIDUE TYD D 138
source : BC2

9) chain D
residue 106
type
sequence I
description BINDING SITE FOR RESIDUE TYD D 138
source : BC2

10) chain D
residue 107
type
sequence G
description BINDING SITE FOR RESIDUE TYD D 138
source : BC2

11) chain D
residue 109
type
sequence N
description BINDING SITE FOR RESIDUE TYD D 138
source : BC2

12) chain D
residue 91
type
sequence N
description BINDING SITE FOR RESIDUE PO4 D 139
source : BC3

13) chain D
residue 92
type
sequence I
description BINDING SITE FOR RESIDUE PO4 D 139
source : BC3

14) chain D
residue 99
type
sequence R
description BINDING SITE FOR RESIDUE PO4 D 139
source : BC3

15) chain D
residue 106
type
sequence I
description BINDING SITE FOR RESIDUE PO4 D 139
source : BC3

16) chain D
residue 109
type
sequence N
description BINDING SITE FOR RESIDUE PO4 D 139
source : BC3

17) chain D
residue 9
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI2

18) chain D
residue 58
type BINDING
sequence Y
description
source Swiss-Prot : SWS_FT_FI2

19) chain D
residue 86
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

20) chain D
residue 99
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

21) chain D
residue 109
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI2

22) chain D
residue 112
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|PROSITE-ProRule:PRU10030
source Swiss-Prot : SWS_FT_FI1


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